Simple sequence repeat (SSR)
>UN85122 CATGATCTGATCATGATAGAAACCTATACACACACGCAAATCAAATCATTCCATTCACTGCTACAGTAAACTTTATTGTTTTTCTTATTTAGTT GTATAGTATGCATGTAAGAAAAACACACACACAAAACACACCAAAAGTATCCCCTCTCTCCCAATTTTTTAGCTACAAATGAAAAAGGAGATCT TCTTACCCTTAACGATGATGATGATGATATGGTACTCATTAAGACTAGAAGTGCGCTTGAGAAAGTAGTTTCTTATTTTACATGATGGAGCATC CCTGTGGATTATCTTCACTGAAGTAATCACACCTACTGACATAACATGGCCTGTTTGGTGGATATTGGCACCCATAATAGTTGTAGCACGGTGG TAGGGGTACAAGCCTTCCACAGCCATAGCGACATGGACCTCCATCCCAACCTTCATAGCACTCTTGGCAACAAACGGAAACGGGTGGACGGGTA GGAGTGTCAGTTTGTGTTTTTGGTTGTGGTTTGGGTTCGGGTTTGGGTTCGGGTTTGGCTTGGGGTTCGGGTGGTTTCTTTTTGACGATTTCGA TGCTTTGAATGTCCCCTCCACCCTTGCAACAAAGCT |
Primers for UN85122 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCCCCTCTCTCCCAATTTTT | 59.875 | 20 | GGTGCCAATATCCACCAAAC | 60.059 | 20 | 211 | 144 | 354 |
2 | TCCCCTCTCTCCCAATTTTT | 59.875 | 20 | GCCAATATCCACCAAACAGG | 60.192 | 20 | 208 | 144 | 351 |
3 | TCCCCTCTCTCCCAATTTTT | 59.875 | 20 | CCAATATCCACCAAACAGGC | 60.192 | 20 | 207 | 144 | 350 |