Simple sequence repeat (SSR)
| >UN85017 TTTAGAGACATATCACAAATAGAGACGCGATAGTTATCATTCAGTCACCTACTACTACTACTACAAGTACATGTTTTTAGAAGGCCTTCATATA ATCTTGTGTTTTCGCTCCAAAGCATTGGTGATTCTTGTAATGCAGTATGCTGCACTCAATGGATACCCAGAAATTGAAATAAAATCCTCTATGA AGTCGTTTTCGATTTTTCCATGTGCCATTGCACCAACCACAAAAACAAGAGTTGCGTCTTTGTCCAATGTAGCCACATAGTCATGCATATCAAC CAACTTTTCCGAACTATGTGAAAACCCTATTTTTCGAGAGTTGACTGGAAGATATTGTGTTACAGGATTCTTAATCACACGCATAAGCTTTTCC CGTTTTCCAACAGCTGAAATGCTTAGCTTTTGAAGTAATTGCAACATGATTCCAGCAAACCGTTTAAATGTTCTTGGAATGCGAACATGGGGTT TGATTTCAAAAAGTACACCTTTTTCAGTTCTCACATACAAAGCTCTTAGTCTACCAGCTTTGTTCAATGGGCTATCTAAGATATTCAATATCGC CTGATGAGAAATGTCAGGTCTGTACTCAGCAGGGTTTCGGTTATTTTTCTTCAAAAAATTGGCATGATCCTCCGAGTTCAATAGTTGGTAACTC TTCCCAACTTTAGCAACTTCCAAAGAAGCCTTCTCGAGTATAAAAATAACACCACCGCTATTCTTATCATGTGGCTGCTCATTCAAATTCACCG GAATCCCAGCAAGTTCTTGTGCAGCCGCTTCGGCTATCGCCTCATCGCCTCCACCCTTCAATTTCTTTTCTTGTTGTTCTTCTTCTTCTTCAAC AAACTCTTCTTCCTCATCTTCTTCTTGGTCATATCTTTCGGTCTTGTTCTTCTTTCTTTTACGCCCCTTAATTGCATAAGGTCTCACCATATTT CTTAGAGCTTAAGAATTTTACTCACTGCAGTTCTTTGAGTGGCAGAAATTGACCGAGCGGTTATGGCTGC |
Primers for UN85017 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CATATCACAAATAGAGACGCGA | 57.953 | 22 | TTTTTGTGGTTGGTGCAATG | 60.393 | 20 | 225 | 9 | 233 |
| 2 | CATATCACAAATAGAGACGCGA | 57.953 | 22 | TGGGTATCCATTGAGTGCAG | 59.522 | 20 | 155 | 9 | 163 |
| 3 | CATATCACAAATAGAGACGCGA | 57.953 | 22 | GGGTATCCATTGAGTGCAGC | 60.492 | 20 | 154 | 9 | 162 |