Simple sequence repeat (SSR)
| >UN04963 AACAGAACCAAAATCGAATTTATCGGATTTAACTTATAATGTGTAGGTTTAAATTATACAACTGTAAACAACACTATAACTTCAACTACTCTAC AAGAAAATACATTAAATAAACAGTGACGAAAAAATGATTTCACCCACATTACACACTTTAACTTACTTGTGAAACGTGGAGACACCCACGTGTG AAAAATCTTTAAGGGCTGCTCCAACATCAAACAAAAGCAAAGAAAAAGGCTAACGACGTTGCCAGTAGAGTCAGTAGAGAGAAGCTTAGACGAG AACTGGCATTTGGGAGATATGGGTATGCATCAGGTGGTGGCATCACACAATTGTCCCCATTAAAATAGATTCTTCTAGGAAACGCCCAACCCTT TTCAAATGTGAATGTTGATTTGTCTTTACGGAAGAGTAGCTCTGATTGAACGTTCCCTAATGGTCCAGCTTGATTTAGAAAATCGTTGTAGAAC TTAACTCCCCATAGCATAGCAGTATCATTTATGGAAGAATAAGGAGTCAGTGGTTTGTAGTTGAAACTGAAAATTTGAGTAAGGTTGTCGAAGT TTGGGTGTTGAGCGACTAAGTTCCACTGAGAGTAATTCATCCTGTAGTTAAAGTTTGTAATGGTGACCTTCACACGCCAGTATTCCTTGTAATT CAGCTTCACGTGCCAGTGAACTCGAATAGGGCACATATGTTTCGTGCATTGAACCAAGGGAGTCAAGCTGTTTTTACCAGGACCGTTAACAACG GAAGCTAGATATGGCGAATTTGGGTTTACACAACTTCCAGGGTGAGTAATGTTATTTTGGCATCCACAGGTGCATGTTGGGCAGGGTACAATCG TCTCATTGTAAAACGAAGAGAGCGATACACAGCAAGTGGGCGTTTTCTGAGCCAAAAACTGTGAATACGTACATGTAACGTTCCATGTCATCAT AGCTTGAGTTACTCTTCTTCCATCTGCAGTAATGAACTTTGTGGGTTTACCAACGACACCAGGTCCACATGTATAGCCAGGGCCGGGTGCAAGC AAGGTGAAGTTCTTGGGTGGCTTGACCGTTTTGTTAGTGGTTCCGGCTGCACCCACACTAACTTGGAATGAGCTAGCATAATTGTCGGGACTTT GGGCCCATGAGTTGATAACACCTCCCTTACAGCAATTTGCAATCTGCTGATTGTAAGGTGTCCCTGGTAATAGATCAACAACCGTTGGGGTCTT CTTACAGCAATGTGGTGGTGCAGTCTTATATCTAGAACAGTCTCCTTGCTCCGTGGTTTGAGCCCCCATCATGCTCCATATCACTTCTTTCTTA GCCCATGTCCAACCTAAGGTCCATCCGGGAGGCGAGACATGGCGGTATTGCTGGAAATTATACATTGTAACGACTGCAACGTAGCCATCAGGGG TCCAACTAATGATATCCCACTTGATTGTGATGTTTCCATTTGGGTCAAGTGCATCATACGCTTCTGTGGAAGTAAAACTGAATGAAGAAAGCAA TATAGCAACAACAATGGTGGAAAGTGACAATCTTGTTAAAGATCTGAAGCAGTAATCCATGATTACTTGCTTCAAAGGTTTCCAAGATCCGACA GTGTGTTTTAAGTGTGTGTGTGTGTTTTTAGTGTGTGTGTGAGAGAAATATTGAGAGATGTGGGAGTGAGTGTCTTT |
Primers for UN04963 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GCATCATACGCTTCTGTGGA | 59.83 | 20 | CACTCACTCCCACATCTCTCA | 58.818 | 21 | 210 | 1461 | 1670 |
| 2 | GCATCATACGCTTCTGTGGA | 59.83 | 20 | ACACTCACTCCCACATCTCTCA | 59.756 | 22 | 211 | 1461 | 1671 |
| 3 | TGATGTTTCCATTTGGGTCA | 59.75 | 20 | CACTCACTCCCACATCTCTCA | 58.818 | 21 | 233 | 1438 | 1670 |