Simple sequence repeat (SSR)
>UN84839 GGGTCTCCCAATTTTAGATGAAAATTCCCATAAATAGAAAGTTGGAAAGAGCCCAGGGGAACAGCACAACAAAATAGGGTCAGCAAATACACGT AACCCCTTGACAACATACTGCTATGTACAACCACCATTCAATCTGTAGTCACAAAGACGTCTTCTAGACCAAGAGCTAAAAACGCACTCCATCT CTATAAGATAATATCCTCGTAAGACCTCACTTACATTGTAAGTCAACCTTGGCTAATCACTTTGTTATCGTTTTTGGCTTTAGTTTTGCCACGG TTGACCTTAAAGTCATTCAAGCTTCTGTAATCTTCTTTGAGTAGTCTATCCAATTCCGGGAGCTTTTTGTGATTCTTTGTCTTAGAATAGTGAT GGAATGCCCAGTATTTTTCAAGACCATAAAGATCTCCCTTATTGTAGAAATCCAAAGTTAGCTGTTCAAAATCCCCGTAAACATCATCTCTAAA TTCCTTCTCCAAGCCGTAGCTATAAAATCTGAAAAGGCATTCCATTCCATAGTTGTAACCAGCAGTTGCATCTTCCAGTGCTATTTTCTTGAAT TCATTATACATTGAAGGGACAAACAAGTCCCTAAGAAAATAAGACCAGAATCTGTAGAGAGTATTCATTTCCTCACTGCATCCGATGCCACATT TCTTCCGCTCATTTAAGCATCTCTTGTGATACTTTACATACTTTTGCTGCCTGAAACCATTTTCTTCTAGTAGCTGATGACTAGGGTGCTGGAA AGGCGGAAATGGCTTCGGCATTGACCCTACAGGCGGACTACCAACTGTAAAGCCGCTATGAGGAGAAGCACCCAGCTTTGAAGACCTTAATCCA TGATTATTATCAGGAGGTGTTGAACCAAAGAAAAACCCGACTGAAGAACTTGGAGGACTTTCTGATACACTTCCATTATTCTTAAGGTTGCTAG AAAACAAGCGCTGGTTCTTTAGCGATTGTTGCTTAAAGAATCCTTTATTTTGCTTCCTTCTAGAATTAGGACTGCCAGCTACTTGATTTGGTAT GGAAGAAGACACTCTAGGAGATTTGGACGTCACATCCTTTATTTCAGTTGTTGGATTGTTTCTTCTACCTTTATTCCGCTTTGATTTTAGCTCC TGTTCATAGTAGTATAGACCATCATTAATGGCAGAAGCAAGCTCATTGGAAAATTTTGTTTCCTCTACTGAACCTTTAGTTCCGCGACCGCTTC TATTATTTTGCGTAACAATCACAAGTCTTTCAACTGCTTGATCATTGACAACCATCTCATCATCTTCATCATCCATCCTTGTTTTAGAGGAAAT ATCGTCCTTCTTGTGTTCAAGCTCAAGCTCTTCATCAAACATGAATGTGCTTCCAAAATCATCACAAACTTTGTCGATATCTTGTTTCGAGAAT TTTGACTTATTTTCTGTGTTTGAATGATCTTCATGGGAAGTATCTTTCTTTAAAGATTCAATATCAACACCCTCTTCAGATTGTTTTGTAGAAC GTTCTTCTATCATAGAAGATTTATTTCCCACAGAAGCTGGAATCCACTTTGACCAACCCTCACGCTTCCTCACCTTGTCACCCTGCACTTCTAG AGTACTAGAGCTCAGTAAAGCATCTACTATAAACGGTATATCTGTACTCATTCTTTTAACCCTTTTAAAGTCAGCAATAGTTGATATAGAAACC CATCCGTGGTCATCCATCAAAGAAATCAAGTATTGATCGCTAAGCAGATTTTGATCACTGAAATAGTATTCAATTTGGCCTCTAAGACTAGCTT TCAGGGCTTGTGCCTGAGCAGGTAACATAGGAATCCCAGCACCCGGTGGATGTGGAACTACAAAAGGTGGATGTGGGACTCTAACAGAAAATGG AGGTATAGCAGGAAGATAGACAATAGAACCAGGCGGACCAGCAAAGGCAGGTCCAGGTAAAAATCCCGCAGGTGGACCAAAAAAGGGGGGCCTT GTAAAGGGTCTTGGCCCAGAATTTTGCTGCTGCACATCATTGTTCTCTTTCGGACCTAACGGTTTCTGATTATCCTGCACGTTAGGCCTTCTAT TAGGAATTTCGACACCATAAGCATTTGGATTGCCTCCTGGAGGATATGGTGAAAGAGCGGGCGGGTAAGCATATCCATGCACAGGTATATGAGG GGGCCAAGGTGCCATGCCGCCATACACAGGTGGTTGATGAAAGGGTAATGGTCCATGAAAAGGTGGTGGAGCGTTTGGGTTAAGTTTATTGGCT GCTGCTTTGTGTTGGCGTGTTGATTGTCTAGAAGAAGAATTATGGTTTCCACGCCCATGTGGCTTTTGGGGCTCAGCAGTCACCTGATTAGTAT TAGTATCAGTATTAGTGTTAGTGACAGCAAGAGTAGTATTAGTTGTTTTTAATGAAGAAAGTGCAGGCCAAGAATGTGAAGCAGAGTCATCATC TGGTGGTGGTGTAGTTGATGTCTTCCATGGTGATTTTGGCGGCGCCGCCACACCAACATCATCATCATCATTAGTTGAATGCTTGTTGTTATCA GGGTCACCCATAACCATATATTTTATGTAAACAGATTAGTATTATTATTAAGGTGTTTGTTGTTTGATTGTATGTGAGCAGAAGAAGAAGAAGA AGTTTAACAAGACAAGGGAATGAGGTGCGCCGTCATGTGTTTGTGTTTGTGTTTGTGT |
Primers for UN84839 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAGAAAGTGCAGGCCAAGAA | 59.993 | 20 | TGGTTATGGGTGACCCTGAT | 60.05 | 20 | 150 | 2405 | 2554 |
2 | TCATCATCTGGTGGTGGTGT | 59.801 | 20 | TGGTTATGGGTGACCCTGAT | 60.05 | 20 | 118 | 2437 | 2554 |
3 | GTCATCATCTGGTGGTGGTG | 59.801 | 20 | TGGTTATGGGTGACCCTGAT | 60.05 | 20 | 119 | 2436 | 2554 |