Simple sequence repeat (SSR)
| >UN84741 CAACATACCATTAAGTTTTGACGGAGTAGACCCAAATAAACCTACCAGAATCTTATTTTGGGTAACATTAGAAATTTTAGAGCTACTGGCTAGA CAACTACCATAGACTATAGAAGCATTTTACTAGAATATGTTCTGAAACCTAATTACTGTCAGATTCGTCACTCAACTCCATAGGGGCAGGTTGT GAGGGGTTCTTGTTGTAGTCGCCCATTTGATTCAGATACCTCTTTTTGTCTGCCTGAGCCTTTGCTTCATATGGTGCCTTCTCTTCAGCTGTCA ATTTGTTCCATCGCTCTCCAAGAACCCTCCCAATTTCTGAGAAAGCAATCCCGGGGTTGTCCTTCTTCACGTTCTCTCGTTCAAGCTGTGAGAA GAACATGAAACTGCTCATTGCTCCCTTGGGTGCATTCGGGTCCTTCTTCTTCTTCTTCTGTTTCCTTTTCTTTGAGGAACCTTCATCAGTATTT TTCTTCTTACTCGAAGAAGTTTTGGAAGTAGTAGCTTCTTTCTTGGATACCTTTTTTGGAATTGTCTCTTGTTCACCTCCACTGACACTGCCAT CAGAGTCATCTCCCCCGGAATCATCACTGGGTGAACCATCATCGTCCTTGTCAGCAACAAAATCCTCGTCCTCCTCATCACTTTCTTCACCAGC TGCATTCCTTATACGCTCGAGATGAGGGTCAACAGCATCATCATCCTCATCCCGCAGCACAGCTGCAACACCATCTGCAGCTTGGAGACCAGCT CCCAGGTTCATAATCTTTAGACCCTTTGAAGTAATAAAATCAAACAGGTTATGGTATTCATTTCTCTGAATGTTACGAAAAATATGTTCTTGCT CCGTCTTGAGTCTGATAACAAGATCGAAGTAATGCATGTTTGATCCTCCAGCAGCATGTCTCTCAAATTCCACATAGTCAATCTCATCATGAAG AATAAGGGTTGGAGGTTTTGGCAAAAAGAAAAAGGTCTTTTCTAACGGATACAACACCCCATCTTCAGCTTTTAAGGAAGACTTCACAGCATAA CCATCCTGACAACTACGGAACTTCCCAGGCCTAGTGATCTTTGTGCCAGATAAGCCACGCAAGGTCATTGTGAAGACTTCGTGAATAAGACCCT TATACGATGGCTCTAACTTGTCTTTGTACTTGGTAGCATATAAGTCCTTGTTCATCACCAAAGTGCTCTCCACCACATAATCAGTTTCAAACTG CATCACAATATGTGGGTACATCGTTTGACCTTTGCGGATAGGAGGGTCCAGGGTAACAACAACAAAGGTATGAGGTTGGTTGGACTTTGGTAAG ACAAAAACACGAACAATACTGCTGTATTGTATTTTGAAATCAGTGGCTTGCCCTTGAAGTCGCAAAAACGACAGATGAAGCTCAACATTGTATC GCCCCCTTGGAGTAAGAATGGTGATGGTGTCAAAAGTGACAACAGCTTCCTCGCCTCCACTACCAACATCAGCCATTGACATTATTTTTTCACG GAAAACTTGTGCAGGAGGACGATTTTCATCCCCAATAAACTGAGTGTTAGAAGTTGGAATGTGGAAACTCATTTCCATCAAAGAGTCTTTCTCA TTTGCACCAGTTGTGTCATCCACATGGAACTCCAAGATAACATCATTTTTTCCTTGAAGCTGTGTCTGGGACACGTCTGCTAAAGATACTTCGA ACGCTTGCTTCGAACCAACAAGAAAAGAAAGCATATTACCATTTATATCGAGTTCTCCCCAATTCTTTCCGCTAACTGAGAGTTGCTTCTCTTC AGGTGTTATACCACAAGAGTGTTGGAAAAAATTGGTCAGGCTAGACACATCCTGATCACGAAAACCGACAAACTTATACTTAAGACCATCCTTT ATCTGTACACCAAGCTGATTACTACGTGGCACCTTCATCCATGTTATACGCGAAATTTCAGACGTGTCAACTTCCACAGCCTTACCACCTCCTT GTTTCTTCCATGCAAGTCCCCGTGAGTGAACCTTTAGTTGCCCCACATTGGCGCCGCCACGGCCGACGAGGGAGATGTTGTTGTACATGTTATG GCCGTCCGCCATAGTTCCGTATTGGTATCAGTGATAGTGAAGTTAGGGTTTGGTTGGTACGAGTGTATTTATAAATGGAGTGAGTGGATAAAGT GGGAGGGAGAGAGGGATTAGCAGAATGGCGCGAAATAGGAAAGAGGGGTGGGATT |
Primers for UN84741 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GTTCCATCGCTCTCCAAGAA | 60.34 | 20 | GCAGTGTCAGTGGAGGTGAA | 59.872 | 20 | 275 | 287 | 561 |
| 2 | TTCCATCGCTCTCCAAGAAC | 60.34 | 20 | GCAGTGTCAGTGGAGGTGAA | 59.872 | 20 | 274 | 288 | 561 |
| 3 | AACTGCTCATTGCTCCCTTG | 60.397 | 20 | GCAGTGTCAGTGGAGGTGAA | 59.872 | 20 | 177 | 385 | 561 |