Simple sequence repeat (SSR)
>UN84390 GTTCACGCCGGATTTACTATTCACTGCCGGATAATACTGTTCACGCCGGATTTACTATTCATCCCAGAAGTTGCTGTTCTTGGTCGAGGTTACT GTTCATAAGAAGGAATGGAAACAAAGAGCTTTGAAGAAGGGTTAGCTGAGGTTACAAAGATGGTGAAACGGTTACAATCCACTTTGTTGTTGCA CCAATCGAAACTCGAGGAATCTTTTAAACGGGCGCGTCAAGATTTCTCAATGTGGTCTGAGAAGTTTCAAGGATCGATCAAGGCCGCGATAAAG GAAGAGATTAATCAGGAGGGACATGTCCATTTATTGGGGGTTCAACTAAACCAACGGAGTCCTAATACGAAGGTAAAGGCAAGGTTGTTTTGGA ATAAGTTTGTGGTTTCATGTGTCCGAACCAGAAAACCTAGAAAGCTAGGTATTTTGCTTGGTACAGAATTTGAAAGATATGGTTTGCATGAACA ACTACAAGTCTGCACAAGCAAATTCAAGAAGATATTGCAGGACTACTACATGCACTTGAAACACATAAAAGGGATACAACGAAGAACATGGGAT CCCGGAATTACCCAACGCAACATTTTCAAGCAACACCTTGAGGACAAGGTGTTTTTGGGGGCGGGAGTAGTGATACGATCCTCCTGTAGTTTTG TTATTATTATTATTAGTTAATCAATAAGTTTATTTAGTTTCCTTTTATTACATATCTTGGTGAGGAAGTTAGGGTATTAGGGTAAGTCTAGGAT ATCTTTATTATAAATAGGCATTAGGTATGTAACTTTCATTATGCAGAATATTATTAATGGTTTAGTTATTTGACTTCATTATTGGGAGAGAGAT CGGCCTCTCGAAAGTTGATCACTTATCTTTATCGTTCTTTTTATCTCTTAATCGATCCGGTTCGTATCATTTAACCATTTCTCGAGGCAACATT TATGGAAAACATGTCCACACGAAAGATGATTAATATCTGCGTCTGGTTTGAACTCGATCAAACACACGGAACATTCTTGTTTTGTGGTACAAAA TAAGGACTCGTACCGCAGTGTTGGGTTCTGGCTTCTGAATTCCTCCATGTAAGTTTCTGAAGGGCTTCCTCGGCATTCAAGTGGTTCTATGAAG TTAGGAAATTCCTCCCGTGATGTCATACGGATCCCGATGACACAAAGGATGGAACGCAGAAGTTCCTTCATGATGGATATTGACATGGCTGTTT TGACCAAAATCACACACATGATTCCAGCATCAGAAGGGTTCGAGTATGGCGAGAGACCCATGATACTTTTCAACTTAGAAGCTTGAAGATGGAA TGGGTAGTTGAAACTGAGGTTGGTTTCTAAATAGAAATGATAAAGAAAAGATGAGTTGGAAGTTTAATGGCATGTGATGATGTTGCCACCGCTA GTTAATATAAAGGGAAAAGAAAC |
Primers for UN84390 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CAAGCAACACCTTGAGGACA | 59.873 | 20 | AACTTTCGAGAGGCCGATCT | 60.349 | 20 | 272 | 591 | 862 |
2 | TACCCAACGCAACATTTTCA | 59.969 | 20 | GCCGATCTCTCTCCCAATAA | 59.224 | 20 | 278 | 573 | 850 |
3 | CAAGCAACACCTTGAGGACA | 59.873 | 20 | GCCGATCTCTCTCCCAATAA | 59.224 | 20 | 260 | 591 | 850 |