Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN84190
CTAGTGTGCATTTGCAGACCAACTCACTAAAATGCCTATCTTCTGTTGGTTGACACTTTCTCATGTCACCAAGCATCTTCAAAGCCAACATACA
CCTCCAAACTACTTAAGTTTCGATGAAAGTCTCTTTATCTTCAGACTGGGCAGTGACCGATATCGTACCTCCATGATTACAGCCACAATTTCTG
TTACTACTCTTCTTTATCAGATAGCAAAATTGGGCTGTTTGCATAACTTTCCAGCTTATGAAGTTCTAGCGTCCTCTTTTCATAGTTACAGAAC
CCTGAACACTTTGGAATACGGCCGACAGCAACAGATTTAGCAGTACATTCGGGTTGACAAAGTTGACGATTATCCTTGTGGTTTACATTCATTG
CAAGCATCAATGCACCGATATTAATATCTTAATTAGTATGTTGGAACGCCTGACCAACTTCATCAGAGATATTTCGCTCTCTCTCTCTCTTGGT
GATGACCTAGGACATTAAGTACCTTATGTAGATGCTTGACAATACAAAAGAACCATGTGTGGGCTCGGCTTGCCAGATGGGCTCCTTATAGTTC
CGTTTCCAATTGCTAGAGGATAATCATTTTGGGTGATGGAAGCACGGATAGTAGGCATATTCTACGAAGTATACACTGCCCTCGTAATGGTATT
GAGGTTGTTCCTTGTGGTGGTGTTTGACCAGGCAAAGGTGTTTGCAATGGCGTCTTCAAAAAGTTTATCACAAACTTCCTTAATCGTCACATTT
AGCGCCTGAAGTAAAATTGCAATGTTGCTAACCGTGATGCCATCAGCATCAGCAAGCCGCGAACCCAAAACCATCAGCAATTAAACCCCGAAGT
TCAAAATAAATTATGGACACATCATGCATCTAAAACATATGTAGAAAATACATACATCGCAAACTCCAAAAAGAACTCATCTGCTCC

Primers for UN84190 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GAACGCCTGACCAACTTCAT 60.11920ACCTTTGCCTGGTCAAACAC 60.01220278 420697
2AACGCCTGACCAACTTCATC 60.11920ACCTTTGCCTGGTCAAACAC 60.01220277 421697
3AACGCCTGACCAACTTCATC 60.11920TCAAACACCACCACAAGGAA 59.97620265 421685