Simple sequence repeat (SSR)
| >UN83625 AAAAAAAAGTACACTTATATAAATTATAGATAAAGAAAAAGAATTGTGACCTTGAGATGAGGTCATAAAACAGTTCTAATGATACATCCAATAA CTAAATTTTCAGGCAGTGCTTATATAGCACCACAAGAATAATTTGCACAAACCAAAATGAATTCAATTATGCTAAAGTGGAAACTCATGTCTAA ACTCAACCTTCAGTGTTGACGCCTTCCGAATTAAAGAGGACGTGTGTGGCGGCCTGCAGCCTTTCCACATAACCGTGCATTCTTTGGGATTGGG AACTCGTCTCTGATGGACCCTGAGTTTGTGTAAACACGAAGGTAAAATTGTTCACCTAGGTATTGTCTGGCCCAGTATTCTGTTCTCACGTTCC ACATTCCAACGTTATCAAGTGCAACGTAAATGGCTGACCATGATTTTGGGTAAACCTGAATGGTGCTTCGTGCAACCCCATCTCGAAGGTTGTA ACCGTTCCTGCTAGCTTGAGTCCATTGTCCTCCATCCATTCCGACAACAAAGAACTGATAGCCATCAAGGTGATAGCTAAGCACAATATCTGAA GGATTTTCAAAGACTATTTCAACAAACGATCTAAAATCAGCCCCCATAACTGATGTATCTTGATAAAGGCCGCCACCTGTTGGTCTATCGGATA TGCTTCCAACACGGAAAACACCACCAATGTTGAAATAATCGGCAAGTTTAAGAGGAGTGTCAGCTGGGACGAAGGACACACTGTTGATACCGTA TCGTTGTTTGCCATTAACTTGACCGGCAGTACTTTGGAGAATGATGGTTCTGCTTGTGTTTATCATGCCGTAGTGGTATGAACCTTGTGGGTTT GGTCTTGGTCCGCTAGCTGTAAGATTGGTCCTGATGGAACGGGCCTGGTTAAGGGACCAATCGACTTGAATGGTGGGCCCACCAGGGATTGGGC CAGAAACTTTGCCCGCGGAGTTGGCATAATGAAGGACACCTGTTGTTGTAAGGATTGGAGTAGTGAACCGGGAGGACACAACAATGTAGTAGTC CTGGCCGGGTTGATCAGCTGTAAATAGTACTGAATATGATTGACCAACATGAACATCTAGAGATGAATATGTTTGTTGGACCGTATGTGTTCCC TCCACTTCGACTAATTTCATCTTGTGGTTTTGAATACGGAAGTTTAGGGAATTTTGTAGTCCCACGTTTGATATTCTAAGCCTGTATGTTTTTC CTTGTTCAACATTGAAATATGCACCACCTGGTCCACGTCCATTGATGAGTATTCCAGCAGGGAAAGGTATTCTATGACCTCCGTCTAGAACTCT TCTCAATATAGTGTGGTTAGCTTTGTACCAATCTCCGATGAGCACGGTGTAGTCGCCTGCGGGTTCATCAAATGGGACAGGGATTCTAGGACGG CTTAGAATCCTAATACCTCCGAACCCGCCAGCAGCTTTGTGGAACGATAAAGATGGGAAATAGTAAAAGCTTCCGATTTGATCCTTGACTTGAA GGATGTATGTGAAGTTTTTACCCGGTGGAATTGGACATGTTGTGCCGTAAACACCGTCTTCAAATGAATTCCTTCTTTGTTGAATTCCGTTCCA GGAGATCAAAAATGGCTCAGGTAAACTGTTGAACACGTTGATAATAAGATTATCATTTGTAACAGAATGAAGATCAGGTCCTGGAAATTGTCCA TTAATCAATATACCCTGTTGACGAACTCCAAGTGGATAAATATCACCCAAAGTAACATTCCAGTTGAAGAACTTGTAGGGATCTTCAGCTCCGG TGATAGCAACTAGAAGTGCACCGACAGCGAAGCAAACGGCGACTTTGAGTTGCTGCATTATTATTATTATTGTGGCCGGTGAAAATGTGAAATA AAAGTGTCTGTCTAGAGAGAATGAATGGGTTATGTTCAAAACAAAAATAATGAATGGGTTGGATATAAAGTGCGGTACAGAGTGTTGTT |
Primers for UN83625 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CAGCTCCGGTGATAGCAACT | 60.419 | 20 | CCGCACTTTATATCCAACCC | 59.297 | 20 | 178 | 1778 | 1955 |
| 2 | TCTTCAGCTCCGGTGATAGC | 60.504 | 20 | CCGCACTTTATATCCAACCC | 59.297 | 20 | 182 | 1774 | 1955 |
| 3 | ACCCTGTTGACGAACTCCAA | 60.545 | 20 | CCGCACTTTATATCCAACCC | 59.297 | 20 | 252 | 1704 | 1955 |