Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN82928
CACAAACAACTACATAAACCGCTAGAGTTCTACATAGCGTGACCAGTCTTACCATCAGAGGGTTATGAACACCGGTGTTCCCCAAAACATCTGA
TCCCTTATGAGGTCTCATATAGTAGACCGCTAAATAGACTTACAAATAATGTACATACTGAGATAGACTTTTGGCAGAGCCAAAACACAAGTTT
CAGAAGAACCGTTACAAACATTACATCTTAGGAAATGCGAGATGAAGCACAGCAATCAACGGTTTGGCATGTTCTTCGGTTTGACCCATCTTAT
AGATATTCAATTCTGATGCACCTGCGTTTTGGCTCCAGTTCTTAAGCACCATTAATGAGACAGGCCCGACCTTATCACCACTTGAGCTAGTAAC
ATACCATTGAAAGTTTTCAGTGTCTTCAAGCTCCTCCTTACTTAACGCAATCGTTGACTTTCCTTCATTAGATTCAAAGAGTTGACTTGGATTT
TTGACAACTGATGATTTCCTTGACTTGCTTTTATTCTCAGCCGATTCAAATATTTTCTGCAGTTGTGCTGCCAATTCCATCTTTTCAAATCCAG
GCACTTCAGGTTTGCTTTCTTCTGAAGAACCTTTAAAATTTCCATATGACATATTAGTTAATGTCGACTTTGGTGAGTCTTTGTTGTCATCGGG
ATTAGCTTCTTCAAAATCTGGAACCACAGGCGGCACTTTTTCTAGCAACTATTTCTGGTTTTCTGGTTTCTGTAGGAATGCCCTTCTTTGCAGG
TACTTAAACAACTCTTTTCTCCATCCTTTTTCATTCGCTTGATCAATACGGTGTTTCAATAAAGCTAGCTCTCGCGGAAGCAGTGTGTTTTAAT
ATCTCTGTGCAAACTCTTAGCCTTTTCTTCAAGTTCTACCAATTCAAGCTTTTTAAGTAATCCGGATTTCACTTTAGCTTTCAATTCTTGACAT
TCTTCCTCGGTAAATTCATCATCTGATAGAGAACTGATCCGGATTTCTGTTTCTAATGCTTGTAGCACAACAGTTTCCTCATTTTCACCAACCA
AACATTTCTTTACGCCTGTTATTTGCATAAGCTGATAAGAACCCTTTGAAAAGCAACTGTTTGGATCTTCTTTAACTCTCACAAAACTTCCAAT
TACCTTATTCTCAAACGTCTCGGGTTCTTTTTCAAACTTCTGCACTAAACTCCTTCTCAAGTACACAAGCCTGATGTTTTCAGGAACAATTGAT
GCAAAACGAAAGTGTGAAACATCAACCACCGGCTCTTTTTTCTCTACTATTTTATCTGAAGTTTTCTTTTTCTTGTTTTTATGGATTACTGGCG
CCTCGTCAACATGAACATGAACATTTTCCTCTGAATCATACCTTAAATCATCATCATCATCGTCATCATCATCATCATCCGATGATGACACCTG
ATTCTCAGCTAAATGAGTCTCCAACGAGTCATATATTCTATTCATCCTTATTGTTTTTCTGTTGAAAATAGACTTTAACCATTCATCGCATTCA
ACTATCTTCTTCTTTTGGAGCAAGTCTTTATCCATACTATATCTCTTTACGATATTTTCTAAATCCCTTTGAGACAACGCATTAGTTGTATCTA
TCTCAAGATGTGTAAGAAATTCGATAAGACGTGTTGATCCCCAGCCGATGAATTCGTCCTTGTTTGACTTTGGTTTGACTTCTGGTTTGACCTT
TTTGTTGGCTTTCTTCTTGGATGACCCAGGTGTTGATCTTTTCAATTTCTTTCCGGAATCATGTGGTTCTGTTTCTTCATTTTCGTCAGAATCA
GAACATTGGTACTCATCACTGTCTTCACACTTATCTGAATCATAATTTTTTCCTGATTTCAGTTGCGCCTTTGCAGATGTCAGAACATCAAGAG
TCAACTTTTCCACTTCATTAATAATCTCCCAGTATTCCTTATACAGAGTCTCATAAGTGTTTCGATTGTCAAAGTCTACTATTTCCCCGTCAGA
GTCCACATCTTTCTTTTCTTCGACAAGCAGTGCAAGCTTCAAGCAGTGATCACAGAATCCTTTCTTCCCTTTCACTTGGACAAAATCAGCAGAT
TTGATACAACGTCCGCATACACTTTTTGGACAGCAATAACATTGATAATCAGAAGGTCTACGACAAGTATCACACTTATGCCAATCACAAATAA
ACTTTTTAGCTTTTGCAGCCGCCTCATCCACGCAGTCAATATGATAAGATTTTATGCAGTCCCTATGGTCACACATAATCACTTCACCACCATC
TTTACAAACAAAACACCATTCTTCAGAATCTTCATCATTTTTACACACTTTTCTACCCTTCTTTTTCATCTCTTTCAACACAATGTGT

Primers for UN82928 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TTATGGATTACTGGCGCCTC 60.0620AGTTGAATGCGATGAATGGTT 59.44821207 13011507
2TTATGGATTACTGGCGCCTC 60.0620GTTGAATGCGATGAATGGTT 58.42420206 13011506
3GTGTGAAACATCAACCACCG 59.85520AGTTGAATGCGATGAATGGTT 59.44821274 12341507