Simple sequence repeat (SSR)
| >UN82518 TAGAGAAAAAACCTGTATATTTTGACATAAGGACCGATGTTTTGCTTATAGTTTGGACCTAAAATGTTGTACAAATACAAATTAAATATGTCTC ATACCACTACTGTAAGATGTGAACTTTACCCTTTATAAACAAAGCATTATAGATTTTCTTATGTGAGCTCGTCTTTCACCTGACAAAAATTAGA TCAGGCTGATGGGCACGGTTGCAGTAAATTCATCCATCACAATAGCTCAATATACAATCACCATGCAGTTTGGCACCATCTGATATTTTGATTA CAGAAATACAGGAGATCACAGTGGCTGAAGTTCTTGCTCAGGCACAACTGAGTCTACTGGCTTATATTGCAAATTAGATTGTTGCCTTCGTCTC CAAAACCACCATGTTCCGAAAGCTGACAATCCAAGTACTAAAACGAGAAACGATACAACCATTGCAGCCAAGTAATTTTTCTGCCACCAAGCTC TATTTGGCGCAGGCTGAATTTTCCAGTTGGTCAATTGATATTTCCCATAGGAATCAGGAAGATGTATACCACCTTCTGCTATCTGAGAGATAAT GCTCAATGCAGTTTCTTTGGACATATGATCAGCCGACTTTGGTGGAGTAATGGACCATCTTGTAAGGTAATCAGTTCCATTAGATGTAAAATTT AGTAAGTGGACCTGTGAACTATTAACATGCAATTCCTGTGCAATTAGCCGAGATAGCTCTGTGATTTGTGGCTTCGAATTAGTGTCGTTAAGAG TCACTGACAAATAAAATGTGATACTTCCAATTTCTGTTTCTCCTGAAGGAATATACTGTGGGGGCGCGACTGGAGGCACAGAAGGAGATATATC ACCAGTAAAAGTTGATCCATTTGGAGGTAAAGAGGCCTGAGGAGGAGGAGGAGGAGGAGGCGCACTAGCAACATGAAGGTTTTCCCATATATCA GAGCAGTTGGTTTTCCAAAATCCAATCTTTTCATGTTCACGGTCATACATAACAAAAGTATTGCGGACAATGATGCCTCCTAAAAGAGTGGTCG GATCCTTTCCATTCTGAAAAACCCCAAGGCAATATGCTCCAGAAACCCTTGAGTGTCTGAACAAGTAGTTCTCTGGGGAAAGTGATAGCTTCTG TCCCTCTCCAAAAACCATTTCAACAGACGGGAAGGTTTTCATGAGTTGTGAAACATCACTTCCAGCGCCTGAGAAGCAAATGTCATTATAACTT GGATCAGGACCTTTAATCTGATGAACACCATTGAGTTCTTTCATGATAGCATGCTTAAATGCCACAAAAGCTGCTTCAGGCAGGTAGGCATAAG TTGTACCACTGTCTAGGACCGTTCCATGCTTTCCATCGAACACACTTGGATTTAATGGCAACCGCTTCCCAGCAACATGCAACTCCTTCAACTC AATATTGTAATATGGGCTGCGCACAGGGTCCGAATGGGAATAGACCATCTCTGCAGGTGGAGAAATTCCACCAAGAACCATAGCGCCACCACCA ACATCCATTCCACCGTAGCACAAAGAAAACGAATCACTAATGATGCCTCCATCAACAAGTTGATCAACTATACTCAGATCACCACGGCCCAAAC CCATTATTCCATCAGCATGCTGACTGTAAAGATCACCAGTTTCCCTATTTTCACAGCCAAAAACAGCACGCTGAGGTGAAAGATCGCTTTGGTT GCCAAAAGATATAATATCCTCGCCAAGGACACCACTGCTAGAACTCATTTCAGCATATTGCCTTTCATAGATGCACTGTTCCCGGTTATTATCA CACGTGCAATCAATATTGCATTTAACAGGTTTGTAGGAGCTCGATAACTCTGGATCAAACTTTGGGTCCTGATGCTTGCCACATTGTTCACAAG TAGAGCACGGAACATACGTAACCGTACTCCCCGTATCAACAATTAGCGCAAACCTCTGCGGTGGCGATCCAATCCACAATCTCGTCGTATAATA CCCGTTGAGAAGAAGATCATCATGAAGAGCCATACGAGCATTAGGACGGTTACCAGAGCTGTGAAGATGACGTCGGGAAATGACGTCACCTCCG ATCCGAGTGGAATTAGGCGGTGACGGAAACAGAGGTAGGAACATGGTGTGACGGGTGGTGCTGCCACGTGGCGGACGGAGAATGATACTGTTTG ATTTATTATCATCGAGTGATGATGATGATGATGAAAGGAATGATGAAATTAATAGAAGTGATAGGAAGATGGTTAATTTGGACATGATGAATTT GAATTTGGGGGTTTCTCTCTCTAGAAATGTTGGGTTTTTAGAGAGAGAAAGAGTTTGGATTTGGAATTGGAAGTGAAGAGAGGATGTTG |
Primers for UN82518 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CATGAAGAGCCATACGAGCA | 59.972 | 20 | AACCCCCAAATTCAAATTCA | 59.111 | 20 | 275 | 1995 | 2269 |
| 2 | CTCCGATCCGAGTGGAATTA | 60.029 | 20 | AACCCCCAAATTCAAATTCA | 59.111 | 20 | 206 | 2064 | 2269 |
| 3 | AGATGACGTCGGGAAATGAC | 59.934 | 20 | AACCCCCAAATTCAAATTCA | 59.111 | 20 | 231 | 2039 | 2269 |