Simple sequence repeat (SSR)
>UN82299 CTATTTTCCAAAACAGTACCCATCTCATTGTTTCCCTTTTTTAAACCTCTTTGATCACTGCGATAACCGCTAACCTTTTTCCAAAAAAGGTAGT ATGTCCCGCCGCGTTGCGGTGGGGGCGCTCGAACTTAGCTATATTGCATACGACGGTGAGTACAAAATAGTGCAGATTTTGCCGTCACTTTGTT CAGGCAAAGTAAGTTATATGTACAGGCAAAGTAAGTTATATGTACGCTGCCTTACAGTTCCTATACCATGTCACCTAGCATGTCCTTGTGCCGC GTAAATGTCCATCAAAACCTTAGCAACCTTTTGCTGACCATCCTACTTGCAGCACAGATGTGGCCGATAAGTCTTGTTTTTAGCAGGTTCACCT GCATCCATAACAGTGTCTGCAGAAGAACCCGTACACACATAAGTTGTCGGCCGCAGGAAAAATGCAAGGACCGTTATTTACACGTTTATCAATA TCATCTGTCTTTCTTTTCCCTTTATCTACCGGTAAACTATTCAATAAAGTTGATGTCTATTGTCATCGTTTACAGAACGGTGACAAAGGCTAGA GTTCGTGTCAATAGGATCCGGTTGACTTGTCGTCGAGTTATCTTCACCATTAAACTTAATACCAGTGTGCAATCAACAACAGTTGAAGTATCAC CCTCTCCACCAATACGACGTTCGGACCCGTTTGCACGATATTAACTTCGATAAAAAAAAATTATCCTTCTTCGCAATTCATGCATCCCACTCAA GAGAGTACGAACCGTTTGCTTTGTGTGTGTGTGTTTAGGACAGATGGAGAGGTGGAGGAGCTGGAGAAGATGATAACGCCACGTAGCTTTGTGT GTGTGTCTT |
Primers for UN82299 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACAGAACGGTGACAAAGGCT | 59.769 | 20 | CTCCTCCACCTCTCCATCTG | 59.785 | 20 | 271 | 542 | 812 |
2 | ACAGAACGGTGACAAAGGCT | 59.769 | 20 | CTCCACCTCTCCATCTGTCC | 59.638 | 20 | 268 | 542 | 809 |
3 | ACAGAACGGTGACAAAGGCT | 59.769 | 20 | TCCTCCACCTCTCCATCTGT | 59.638 | 20 | 270 | 542 | 811 |