Simple sequence repeat (SSR)
| >UN81679 CTGCAGTCATATTCTGATCGAAAGTACCAATAATAACTAGAAAAGAACACATACAAGAATACATCCTAAAACATCACTGCACTCAAAAGCATGG AGTTGTTCTCATAGATTGGTATAACTATCCAAAAATACAAAATGAGAGGACATGTTACAAAATGGCAACCTCAAACTCAGGACGCACCAGGGCT TTAACTCTTGCTAGATAAGCTGACCCGTAAAGAGTAGGTTCGGCACAATGATCATGAAGCTCCAGTCAAACTTTTAACTTTGGACAACGTAAGT TGATCGAGGTCACTGTAGTTTGGAAGCTATCCTGTTTAATTGAGTTGCTTTTTGAAATTCTAAGGCATGGTAATTTTTCTCGACTTCCCATGCT TGCTGGGCCATACCATTAAAAGATGATTTAGCGCCCTTCTCATTTGTAACCTCTCTAGGGAACGGGATGCGGACCTCAAAGACGTCATTTTCGG GAGAATAGAGATGTACGTCGAAGCCTAGACGGTCGAGCCACACCATCTTTGCATCGGACACCTGGAGATGTGAGTCGACATAGATGTTGCAGAA TCGGAGAACGTCTTCCCTGTTATCTGTGTTAAAGCCATCAACCAAGCGCTGGGCGCAGTCTCGGAGTGGATCAGGGTTTGCGAGTGTGTAGTCG TGAGAAGAAATCCAAACACCATCCTGGGTGAAGTTGTCTAATTGGAGGACGCGTTGGACATGGAGAAGGTGAATGAAGTTGGAGTTGGCTTTCT CACGGAACCTTTTTTCCCAAAGAGACTGAAGCTTATTGAGATGAATGGGGTTGGAGGGAGGGTGGAGGGAAGCATGGATGGTACATTGAGTGGT TCGCAATCCGGCGCATTGCTCTAACTGAACATTAAGGGTGGAGTTGGTGGTATTAATAGAAGAAGATGAGAAATGATGATTGGGATTTAAGGAA ACAATGGGAGAGCCATCTTGGGGATCAACAGCAAAGCGAACACCAACACAAGAAAGCTGTAATTGTTCTTGACTAATAATAGATGAAAGGGTGC CAACAGAGGATAACTCCATGATTGTTCTTGCCACCTCAGCAGCTGAAGGCTTATTATTCTGGCTGCTAATTATTATTGACTGAGGAGGAGCAGC CACCTCAACAGAAGAAGAAACACAACATCTTCTATGAAACTTCTTCTTCTTCTTGGTCTTATTGTTGTTATTAAATTGGAGAAATGGGGAGTTA CAGCTGATTGAGGAGGAGGTACTAGTAGTATAATTATGATTTTGAATAATAGTGGTGTTATTATGTGCAAACATCATCATCATCATCTTCAATT CACAATTT |
Primers for UN81679 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GATCAACAGCAAAGCGAACA | 59.995 | 20 | GCTGTAACTCCCCATTTCTCC | 59.954 | 21 | 264 | 963 | 1226 |
| 2 | ATGAAAGGGTGCCAACAGAG | 60.111 | 20 | GCTGTAACTCCCCATTTCTCC | 59.954 | 21 | 204 | 1023 | 1226 |
| 3 | AGATGAAAGGGTGCCAACAG | 60.111 | 20 | GCTGTAACTCCCCATTTCTCC | 59.954 | 21 | 206 | 1021 | 1226 |