Simple sequence repeat (SSR)
| >UN04833 ATTCAGTCTCAAGTTCAAGCAAGACATATAATAACTTCCCAAAAATATTACATAACATGTCAAAACTAGCTTCGAAAAGGTAGTCTAAACTACA TTAATAATAATCTCATCACATTTATCATCCATAATAGAAATAGAAAAAGAACCGATAGATTTAACATTCAGAAGAAGGCTACAAATAACCATCA CATTTAATCATCACCAAAAGTTGTCTTCTTTCCTGTACCAGGCTGTGCCATGCTAGGCCTGCTAGGTCCACGGCCTCTCCCACGACCACCACTA TCTCTGCCACGGCCTCTTCCACGTCCACCATCTCTGCCACGTCCACTACCAAACCTTCCACCACCACTACCAAACCTTCCACCATCTCTGCCAC GTCCACCATCAAAACGGCCTCCACCACTAGAATTACCATCATTTCTAGGCTTAGATTCCGATACAGTTATATAACCTCCACCGACTTCAGTTCC ATTAAGTTCAAGAGCCTTGTTGAAACCATTGCTATCAGCAAAATCAATGAAAGCAATCCCCTTTGGAGCACCAGTATCATAATCTTTGGGGATG GCAAGTCTTGAAATCTCTCCGCACCCACCAAAGTGTCCCTCGAGAGTAGCCCTAAGACTATCAAAATCATCATCAGCTCCAAACCCTCTAACAA AAACGGATTGTCCTTGTCCTTGACCCCCACTCTTCTGGAAAGACCTGTCGTTGCCGCCAGGAGTGTATGAACCTCTTTCCCCTCGTTCCTTTGC TAAATCAATTTTCACATCACGGCCAAGCAAATCTGATCCATTGAGTTCAAGGGCTTTCTGGGCTGCATCAGGGGTGGTGAATTCAACATGTCCA TAACCAGCAAAACGTTCATCTCTCATGGCAAAACGGACCTCAGCAACCTCACCAACATCCTTAAAAAAGTTAACTATGTCATTTTCTTCGATGG AGAAACTTAAGTTGCCCATGAAAATTGTTTTAGATCCAGTTGCTTGAGGAGTAGCTGGAGTTTGAGGCGCTTTCTTAGCTGATGGAGCATCAAC CATTTCCACATCAGTGTTCTTCTTTGCAGTTTTAGGCTCTTCCTCCTCATCAGAACTCTCCTCTTCTTCAGATGATTCTTCCTCTTCTGAGCTG CTCTCTTTCTTGGCAGCAGTCTTCTTTACAGCTGGCTTAGCTGGCTCGTCATCAGAGCTTTCTTCTTCAGAGCTTTCATCCTCACTGCTCTCTT CAACTTTAGCAGCAGCGGGTTTTGCAGCAGGTTTTGTCTCAGTTGGCTTAGCCTTCTTCTTCTGGGGCTCTTCTTCATCAGAGGAAGAATCTTC TTCTGAGCTTTCATCAGGAGATGACTCTTTCTTAGGTGCAGCAGCAGCAGCAGCAGGTTTCTTTGTTGGTACAGCTTTAACCTCTTCCTCAGAA TCACTGTCATCATCAGAACTGTCTTCAGAAGAACTGTCTGCTTTCTTTCCGTTTTTAGCAGCAGCTGGTGCTGGCTTCTTTGTAGCAGGCTTGG CTTCCTCCTCATCAGAACTGTCATCTGAATCAGATTCAGAACTTGATTCTACCTTTTTAGCAGCAGCTGCACCATTTTTAGCAGCAACTACTGG CTTCTTTGGTGCCTCATCTTCAGATGATGAGTCATCAGAGTCCTCTTCACTGCTTGATTCTGCCTTTTTGGCAGGAGCTGGTTTCTTAGCTACA ACCTTCTTCTGCTCTTCCTCAGATTCTGAGGAGCTGCTATCCTCATCAGATGAAGAGTCCTTTTTCTTGGAACTCTTCTTAGTCTTGGTCTCAG TCTTAGTCTTCTCGATTGCCTGAACCACAGCACCGTTGACAACTTTCTGCTTCTTGCTACTCACTACTTGCTTCTCAATAATCTCCTCTGCATC TCTCTTGCCTTTTTTCCCTGATTTAACAGGAGCCACAACAGCAGGAGCAACCTCGGCCTTGACGGCAGACTTCTTGCTTGATTTAGGCATGATA ATAGTAGTTACGAAAGTAGGGTTTATGAGATGTGAAAGAAAGGAGGCTGAAAAACCCTAGGTGCAATTAGG |
Primers for UN04833 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CCTTCTTCTTCTGGGGCTCT | 59.95 | 20 | GCTACAAAGAAGCCAGCACC | 60.022 | 20 | 223 | 1274 | 1496 |
| 2 | CTGGGGCTCTTCTTCATCAG | 59.943 | 20 | GCTACAAAGAAGCCAGCACC | 60.022 | 20 | 213 | 1284 | 1496 |
| 3 | TCTTCTGGGGCTCTTCTTCA | 60.065 | 20 | GCTACAAAGAAGCCAGCACC | 60.022 | 20 | 217 | 1280 | 1496 |