Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN81000
ACCCATGTGACCTTTGAATACCCATTGGGCAATTCTTGTATCAAACAACCAGAAGGCCTTCTTCTACATCTTGAGATCGACGAAGTACGCAAAT
TATCCAAAGATACATCAACCACCGCCCATGTACCATCATTATGTTGTTTACAGTACCTAACAAAGTAGTTTTCTCTTGTTGGAACCAGTGGTGA
AGGAACCTGGTACTCGGCTGTCATCACTTGTAGAGCTCCATTGTAATTGCCAGCAACTCCTGTTGAAAGCACTTCCAAGGTCATTGCTCTTGAA
ACAATGCCAGAAAACACATTTGACCACTGATTCACATCCATTAGAATTTCAACAAGAGTGATATGATTCATGATGACCACTGCAGATTCCCTTG
AAGCTTCGGATATTAATCCCAATGGTTTTGGACCAATCCCACGTGGAAAGGTTCGCATGTACTCTTCTTCACTCAAAGCCTCGGATGACGTATC
CGAGTTTTGAACCCACAAGGGATCACCAGCTTGAGCCATTCTGATTAGCTCCTCCATGGCTGCGACTGCTAGCTCGATTATAATAGGTTTGTCT
GCTTCAGTTGGGCCTGAAACTGACCGAAGAAGGTCATTCGCCCCATACATGTCTCCTACCATCCCTTGTTGTGGGCCGAAATTAGGAACGCCTA
GATCAATTGAGCGAGTTGATCCATGAGACGGCATGTTGGGATAACTTAACACTGGCTTGCCAACATACTTTGCAGCGATTCCAGATATCCTATC
AATCTCTTCATGTAGCCGAGTATTTTCTATTCTCAACTGTTGTTCATCAAAAGACATCTCTCCGATAGCAGCAGGACCACCACAGTTCGGACAA
GTAGCATTGGCAAGGGCTTCTTTGTATCGTATATTCTCCATTCTTAGCTTTTCATTGTCATTCCTCAGTGAAGAGTTCTCATGGCGTTCATGTT
GAGCCTTCATTTGAGTCCTTTTATTTTGGAACCAAAACTTGACTTGCAGAGGCTCCAAAGTTAATCTTCTTCCAAGTTCCTTCCTTTGTTTATC
ATCTGGATGTGGGCATTCTTTGAAAAATGCCTCTAATTCCTGGATTTGGTGTTGTGTGTGACGATGGTAACGTTTCTTCTTGTTGGGACGTTGA
CTGGGATCCTGATCATCGCCGGAGGGAGCTTCCATGATATCAGTACCAGATTTGCTCTCGTAGTCATCATCTCTAAGCATATCAAGCTCATTCT
CTGGTGTTTTATGGCTCATGTCAAGAAGATGATGGTGATGGTGACTCTCAAACATGTTGGGTTGAAACATTTTCGTTTGTTCTTCACACTCTAG
TATATATTGAGTCTAGCAAAAAGATCTGGTGTAGAGGAATAAAGGGTTAACTGGAAACCACTTTTAAGAGAGTGAAAGCGTGGTTTTCAGGCTG
GTTTCCATTGAAGCTACCTGTATTTTTCTTGTGAATAGAATTTAAGAAGAATGAAGAGAGAGAGAGAAAGAGAGAGATGAACAGGTGGGAGAAT

Primers for UN81000 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GTGGTTTTCAGGCTGGTTTC 59.57420TCTCCCACCTGTTCATCTCTC 59.24321107 13961502
2TTTTCAGGCTGGTTTCCATT 59.54620TCTCCCACCTGTTCATCTCTC 59.24321103 14001502
3GTGAAAGCGTGGTTTTCAGG 60.66820TCTCCCACCTGTTCATCTCTC 59.24321115 13881502