Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN80998
CACTCGATAACGTATTAGTTTACTCAGAAATCATAATAAAACTAGGCAAAGTCAATACCCGAACCTATAACCTTCGATTAATGGTGAAAAATAC
ATTCTTGCCGTTGGCACCATACACCAAAGGATTGTAGGTGCGTTCTTGACTTCTTCCATTAAGTTTCAGATGACAAGAGTAAACATTGGCCACT
TAAGCCCTCCTTCATCCCGTAACTTGGATTCATACATATAAAACGACCAGCATGATTATGGATTCTCAAGAGCTACGGCAGCTTTGATCCTTTC
AACAGTGCACTTAATAAGATTATTCACTGTCGCGACCGACCCAAGTGATAATTTTGCTGTTGGAACAGAATCAACTAGAATCTGAAATGCGACA
GTCAGTAAAGATCCACCATTCCCAACCTCTAGAATTCTTCCTCCTTGATGTTTTCCAGCTCCATCAGGAAGTATAGCGAAACCAGATGGTAGTA
AGGCAACATAAGCAGGGTCGCCGCCATTCAACACCACGTTCATTGCTGCAATATCTACTGGTGCGTAGATAACATATGAGCCCGTAGAATCACT
TGAACTCTCCTGAAGTATGAGCATGTTTCCCTGGCTCGAATTTGCACTATTGACTCGTAAAAGTGAGACACAATTGCCTGGATCGCGACCATTG
GCGATATGTGCCATTTCTTGAACCAGTCCACCATTTGAAAGAATATCCCACTCGCTCCTCGAGTTTTCATCACGAAGAAAATCAAAGACCCGTT
TCGGTGGAACAGGGATCCAGAATGATGTAGCAGCACTTAGCACGATACCAGGAGGCCTGCCTGGATCATCGACACTCTTTCTAGTCATAACACG
AACATCATCCGCACCGCTACCAGACAAAGTTGTCCATGTATGTGTCGTTGAAGCTCCAACACCGCTACAAAAACTCAAAACCATTCGCTCGGAC
AACTTCAACATACTCTTTCTCCCTTCTAGAGTCGTTATAACTCCGACGTCACCAGCAGGAATATTGTTAGCCATCGCGCTTGCAAGGCGTTCGC
ATTGTCTATCAAGTGTTGCTACCCATCTTTGTGCCCCAAATGCTAAACCAGAATTCACTAGTGACCGATAAATATCATGAACAGCTCTGTCATC
GAATTCAACATGTTCAACCCATGTAACCTTCGAGTATCCATTGGGAAGTTCTTGAATTAAACAACCTGATGGCCTCCTCCGAGATCTTGACATC
ACACCAGGTCGTAAGTTGTCTAAGGATACATCGACCACGGCCCAGGTCCCATCAGCATGTTGTTTACAGTACCTAACGAAATAGTATTCTCGGG
TTGGAACAAGTGGCGAAGGAACCTGATACTCAGCAGTCATCACTTGTAGAGCTCCATTGTAGTTACCAGCCACTCCGATTGAAAGCACTTCTAG
AGTCATTGCTCTTGAAACAATCCCAGAAAATACATTTGACCACTGATTCACATCCATTAGAATCTCAACAAGATTGATATGATTCATGATAACT
ACTGCGGATTCCCTAGAAGCTTCAGACTGTAATCCCATTTGTTTTGGTCCAATGCCTCTAGGAAACGTTTGCGAGTACTCGTCTTCATTCAAGG
TCTCTGATGAGTTATCAGAGCTTGGGACCCACAATGGCTCACCAGACTGGGCCATTCTAACCAATTCCTCCATGGCTGCAACTGCTAGTTCGAT
TATAACTGGTTTGTCGGCCTCACTGGGACCTGAAACTGACCGCAGAAGGTTGCTTGTTCCAAACATGTCATCTACCATGCTGGGTTGTGAACTA
AAACTGGCAATGGGAAGATCAAGAGAGCGCGGCGGCCCATTTTGTGATAGATTAGGGTAAGTTAGCAATGGTTTGCCAACATATTTTGCAGCAA
TTCCAGATATCCTATCAATTTCATCACGTAGACGAGCATTTTCCATTCTGAGCTGCTGTTCATCAAATGACATCTCCCCAATGGCTGCAGGACC
ACCACAGTTGGGACATGTAGCATTGGCAAGGGCTTCTTTGTATCGTATATTCTCCATTCTTAGCTTTTCATTGTCATTCCTCAGTGAAGAGTTC
TCATGGCGTTCATGTTGAGCCTTCATTTGAGTCCTTTTATTTTGGAACCAAAACTTGACTTGCAGAGGCTCCAAAGTTAATCTTCTTCCAAGTT
CCTTCCTTTGTTTATCATCTGGATGTGGGCATTCTTTGAAAAATGCCTCTAATTCCTGGATTTGGTGTTGTGTGTGACGATGGTAACGTTTCTT
CTTGTTGGGACGTTGACTGGGATCCTGATCATCGCCGGAGGGAGCTTCCATGATATCAGTACCAGATTTGCTCTCGTAGTCATCATCTCTAAGC
ATATCAAGCTCATTCTCTGGTGTTTTATGGCTCATGTCAAGAAGATGATGGTGATGGTGACTCTCAAACATGTTGGGTTGAAACATTTTCGTTT
GTTCTTCACACTCTAGTATATATTGAGTCTAGCAAAAAGATCTGGTGTAGAGGAATAAAGGGTTAACTGGAAACCACTTTTAAGAGAGTGAAAG
CGTGGTTTTCAGGCTGGTTTCCATTGAAGCTACCTGTATTTTTCTTGTGAATAGAATTTAAGAAGAATGAAGAGAGAGAGAGAAAGAGAGAGAT
GAACAGGTGGGAGAAT

Primers for UN80998 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GTGGTTTTCAGGCTGGTTTC 59.57420TCTCCCACCTGTTCATCTCTC 59.24321107 25402646
2TTTTCAGGCTGGTTTCCATT 59.54620TCTCCCACCTGTTCATCTCTC 59.24321103 25442646
3GTGAAAGCGTGGTTTTCAGG 60.66820TCTCCCACCTGTTCATCTCTC 59.24321115 25322646