Simple sequence repeat (SSR)
| >UN80670 GAGGATAAAGCATAAACATTCATGTTGTTCTTATTATATTTGACAGGATTCACAAACTGAAAGTAGCTGAAGAAGACATAAGGTTACAAGTGAA AGAGACGTCCAAACGCCCTTTGCCTTACATCTGAATGAAAAAAAAAATACACTCCGTGATTCACAGTCCAATTAATCCAACTCTCATTGTTTTT TAACAACATCCAATGTACTTGATATACTATGTGAGCTAACAAATGACGACTATAATCTACAAAATCTGAACTACTTTGATTAAATGGTCTACAC AAACCACCATCTCCGAAAAGATATGACACAAACGCCATATATTTCAGAAAGACAGGTCTTATCTCAGTGAGCAGCAACGGTAGCAGTCTCCGCC TGACTAAATGCTTCCCAGTTAACTTCTTTTAATGACTCGAGTCGCTGTTCCAATGTAACAAACCCAACTTCAGGGGCCACAATGCCACTTGTCC CAGCTTTGTAGATCAATACTATGCTCTCTCCCATGTCAGGCCCATGAAGTTTTCCTGTCAGCAAAACTCGTAGGGGCATGAACAGAGATTTTCC CTTGCGTTTTAATGATTTCCCGAAGGCTTTTACCCACTTTTGCCAACCAGACTTTCCTTCTTCAAGTGCAGCTAAAAGCTCACCACTATCATAT GCAGCTAACAGACTCTCTGCAATCGCAGGAAGGCCATCTTCTAAGATTTCTCTACCTTCAGAACTTGATAGTGTATCATGAAATGGATAAGATA GCAAGTCTGACATTAATTTTTCCGCATCTGTTATCACATGCATACCACCTTCCAGGAGCTTGTAAGCATCTTCTATAAAAAGCCCTTCGGATTC ATTGAGGATGCCGGCGCTCCTCCATTGCTCACCGATGGTCTTTATCAACTCTTCTGTGGGAAGAGCTTTCAAATGTAGGCCATTCATCCACCTC AATTTGGTTGAATCAAATATGGCTCCACTTTTGTTGACGCGGTTAATTGAGAACTTTTCAACTAGTTGATCCAGGGTAAAAAACTCATCATTAG TCCCATCACTCCAGCCCAACAACGCTAAATAATTCACAATCGCTTGAGGCAAAAACCCCATTTCCCTATACTGTCCTACTGAAGTTGCACCATG TCGTTTTGACAGTTTGCTCCGATCAGGGGCAAGAATCAATGAAACGTGTGCAAAAGAAGGCATCGGGAACCCCAGTGCCTTATATATCAACGCT TGCCTTAGTGTATTAGGTAAGTGCTCTTCAGCCCTTATAACATGTGTGATGGCCATAGTAGCATCATCAACAGTGACACAAAAATTGTATACTG GTTGTCCGTTACTTCTCATAACTACAAAATCCCCAAGTGTGTCTAGATTCCAGCTAACCTCTCCTCTAATCAAGTCATCGATTTTCAAACTCCC TTCCTTTGGCACTCGGAACCTGTAAGTAAATGGGGTACCCTTTGCTAACTCTTCTTGAACTTCCTCTTCTGTAGCAGTGGCCCACTTTCCTGTA TATACAGGAGGAAGCTGTTTTTCCTTTGCAATCTCCTTCATTTGCTCGAGTTCCTGATTAGAGCAGAAGCAACGATAGACTTGACCGGAGTTGA GAAGCTTGTTGGCATACTGTTTATACAAGTCATTCCTTTCAGACTGGCGATACGGGCCATAGTCACCACCAGCATCACCCGGGCCCTCATCCCA TGTTAACCCCAGCCAAGAAAGATCCCTCAACACAGCTTCCTCAGATTCCTTAGTTGATCTCTCCAAATCCGTATCCTCTATTCTCAATATAAAT TTCCCGCCTTTAGACCTGGCAAAGAGGTAGTTAAAGAGAGCAGTGCGGGCCCCACCAACGTGGAGATTACCGGTAGGAGATGGGGCGAACCGGA CACGTACTTGTTGCTGTTGTTGGTCTGAAGAAGAAGAAGAAGCGGAGATTGAGGAGAAACATTTTCTTGTTCTTGATTGTTTTTGAACATTTTG TGAGATGCGAATCAAAGTGTTGGAACGGCGATGGGTTTGTGATGAATAAGAGTGGCTACGGAGTATGACTGATGATGATTGTGGTGGTGGGATG GCCGCCCGTGTGCCGCCGCTGATGTTCATTCCGATTCCGGCGAGAGTCGCCATTTTCATTTTCATCAATAAAAG |
Primers for UN80670 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GTTAAAGAGAGCAGTGCGGG | 60.015 | 20 | GCCGTTCCAACACTTTGATT | 59.978 | 20 | 188 | 1816 | 2003 |
| 2 | ATTACCGGTAGGAGATGGGG | 60.032 | 20 | GCCGTTCCAACACTTTGATT | 59.978 | 20 | 152 | 1852 | 2003 |
| 3 | CGTGGAGATTACCGGTAGGA | 59.948 | 20 | GCCGTTCCAACACTTTGATT | 59.978 | 20 | 159 | 1845 | 2003 |