Simple sequence repeat (SSR)
>UN80630 GTTCATCTTCTTCAAGTCCTCTTGTGAAAGAAGTGTTTTCTTTCCACCACCACCACCAGTTTTATCATATGGTTGTGCCATCTTCCTCAAAAAC TCTCTTGCTATATGCACAGCCATATCAGTACTCAAGTTCAGGTGGGCCTCACGCAGGTGAGACAGAATCCATCCAGGCAATTTAGAGCGTTTGT CATGTCTGGTATATCTTTTGTCAGCAAATATCATCATTCCATAATCTGCCTTTGAACGGATAACGCGTCCCACACATTGAGCAGCTTGTCTCAG TGCATCAAAAGTCAAAAAGTCGCCTTCTTTAATCTGGAAAGTCTCTCGCAAGTACTCTAACCGAGCAAGTAATATCTTGCTCAATGTGTACTGG AAAGGAACGCCAAACATGATTACAAGTCTCCCATAATGTCGGTCAAAGTCTATACCTTCTGCAACCTTCCCCCTAGCGACAGAGAAAAACACAG CACCTCTCCCACAATCACAAGCTTTACGATAGTTATCTAGAGCTAATGTAGTCTCAACAACGTCTTGGGTCTCAATGAACACGAGTTTACGTTG CATTATTTCCTTTAAGATCCCTGTTTCATTCCAACTGTTCACTATGGCATCCATATAAGAGTAACTGACAAAGAAACAAACAATTCCATCAGGA ACTACTGACACCATCTCCAACAA |
Primers for UN80630 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCAAGTCCTCTTGTGAAAGAAGTG | 59.958 | 24 | ACAAGCTGCTCAATGTGTGG | 59.905 | 20 | 266 | 12 | 277 |
2 | TCAAGTCCTCTTGTGAAAGAAGTG | 59.958 | 24 | AATTGCCTGGATGGATTCTG | 59.894 | 20 | 165 | 12 | 176 |
3 | TCAAGTCCTCTTGTGAAAGAAGTG | 59.958 | 24 | GGCCCACCTGAACTTGAGTA | 60.111 | 20 | 131 | 12 | 142 |