Simple sequence repeat (SSR)
| >UN80305 TTTTTTTTGCGCAAAAAAAACACCATATTTCCTATCATAAATGGTCGGCCCATATAAACTTATAGAAAATCATGCGATGAACAAAATGTGAGCC ATATCCTCCTTACAAATTTAAACTATTCTGACCCGAAAAAGAAAAAAAAAAATCTTACCTTCACTTTTAGCTACATGTCTTTACCATTTTTTAT CTTGTCCGCATTCCCCTTCTTCATAGCATCATCATCTTTGCTAGTCTCATTAGTTTCCGCTGCTTGTAAAATAAGGTCTAACGGAGTAGCTGCT GGATCGAGTTCAAGGCAACCTTTTGGAGAATTATGTCCCTCTGACCCTGTCAGCACATACTTCGGGACTTGATGTGAGAATCGGAACATTTCTT CTTTTGGAATCACCATCACTTCATTTTTGTGCGTATGTGGATGAAACACGGTTCTGAATCCTGCAAACTTGACAAGGGGGCTAACACGGACACC TTGTTCTTCATTGTAGTCCTCAAGAACTTCTACCATGTCATACTTGTGTATTACATCTTCTGGAACACTCTCATTCCAGTCACGGGACCAGTTT CTGTAAAGGGCCCACACTTGCCCTTTACTGGGAAGAATCTGAACAGCACCTCGTGGGGTTTTTTTCCACTCGATTTTCTGAGAAAATGAATTCA AATGCTTGTAGAGTTCGTGCTTCCCGATTCTAAATTCCCCACAACTCTTGCGGAAACCGTAACCTATCCACTCAAATGAGCCAAATTCAGCTGT GGATTTTGAGTTTAACCAACTGATTTTCATCTTAAGTGGTTTTCTCGAGAGAACTTTATGAACCATTGCATAAAAACGCGGCATTCCATCATCA TCATCATAAGCAGCCCAAACTTGGTTATCTTCAAAAGAATTCTCGGTTCGGTCAAGGTCAAAATCATGAAAATCGGGATCAGGAACATTCATTG AAGGATCTTCTTCTTCTTTTTCTTCATCACCCTCTTGGTCATCCGCGGTTTTGTTGTTATTTTGAGTTGACTTTACTTCCTCTTCTTCATCTTC CAACTTCTCTTCAGAATTCCATTCACTTAATTTTCTGAGAATCTCATCTCGAGCCTTCTTCATCAGTATGTGTCGGGTTTCCAAATAATTCAAC TCTCGAGTTCTATTTACTGAATTTTTATAATTAGAAAACGTGTGTGGAATTCTCATGCTGGCGCCTCCATTTGCTGTGGACATTTGATACGGGA TCTTACCAGAAGCCTGACTCTCCTCGTCTGCTTTTGTCTTTTTTGAGGGCCACCCAGAATAAAATTCTTCACGTTCTCTTTTTAACCTTTCATT GACTTGCTGAACAACACTTGCGGCTTTTGCTGCAATGGACGGCTCCGTTTTATTTGGCCCATGTGCCCGATGGACCGTATTATGCGTAGCATAA TTTTTTGAATTCTGAGGTCGTTGAGCATTTGACTGAGTTGGCTTTGGAAGGTTAGAAGGTGGTGCCATTTCCTTGGCCATAAAAGGCTCATGAC AATTGGGGCAAAGCAGGGTATGATTAAGATACAATTTAAGATACTCGTAATGCATCTTACATCGATGACAGATAGTCCAAAAAGTATCATTCCG CTTAGAAACAGCCGGTGGCGGTGGTGGGCCTGGCGCTGGAGGGCGAGGCGCTGGTGGCACAGACGTCCTAGTGGCAGTAGTAGGATGGGCCCTT GACTTTGAAGTTGTTCGATGTGCAAAGTGGACTCCATTAGCACCACCAGGGGGTGCGGCTGATGGACCGCCAGACTGAACTTTTTGTTGGACCC CTCTCACACCTCTCTTTTGGTTATAAGCTGTTCTTTTAACCTTATCTGACAATAAACTCCATGCTTCTGAAAGAAGTTTAAACGCACCATCTGC ACCCACCGACTTGTTTTTATCAGGATGCAACATGAGAGCCAATTTACGGTAATGTTTCCTAATTGTTTCATCATCGTCATTAGGATTCGCACCA AGTATCCCATACCAATCCGCTTCTCCACTTACCTTGTTCTCCGAGGCTATATACACATCAAGAGTAGTTAACATCTGAGAAACGCCATCAAGCG GAGGATATAGCGTTTGGGCCTTTAAGATAAATTTCTTGGCGCCCGCATAGTCTTTATCAGATAACTTTTTTTCTGCAATTGTCTTCGCCCTGAC AGCTTCATCTTTATTGCATTCCATAATCTTATTGCATTCCCGATGAAGCGAAAGAGCTAGCACGACTATTGAAGGCTAAATTCAAAGCCTTTTC CTTTGCGATATGAGAGGTGGGCT |
Primers for UN80305 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TGCGGAAACCGTAACCTATC | 59.96 | 20 | GTTCCTGATCCCGATTTTCA | 59.871 | 20 | 226 | 707 | 932 |
| 2 | TGCGGAAACCGTAACCTATC | 59.96 | 20 | TGTTCCTGATCCCGATTTTC | 59.871 | 20 | 227 | 707 | 933 |
| 3 | TTCCCGATTCTAAATTCCCC | 60.089 | 20 | GTTCCTGATCCCGATTTTCA | 59.871 | 20 | 254 | 679 | 932 |