Simple sequence repeat (SSR)
>UN80136 AGCAGTATCCCACAAGCCTAGATTGACAGTGGCACCATTGACAACAACATTAGCACTGAAATTATCAAATACAGTTGGCACGTAATCCGTGGGG AAAGTGTTGCTGGTGTAAGAAATCAAGAGACAAGTCTTTCCGACGGCACCGTCACCAACCGTGACGCACTTGATGAATCTGGAAGCGCTCATTA TTATTATTATTATTTCAGATCTTCAAAACAAGAAGACCTGACTGATTTACCCACAATTGATAATTTCCGTTCCTTATTTCCTTCCTTGGTTTTC TTAATCTGACAATTGATAATTTTGTTGAGGACGAAACCCTAGATCAAATGCAAAAGGGGAAAAACTTGTTGATAGGAATGGAAGGTAAGAAGAA GGAAAGAAAGAAAGAAAGAAAGAAATGTGTTTGGATGAATTACCAACCTTGTGAATGAATTGGGCCGGAAAAGAATGCTGTTGAAGCGCTCTCT CTCCTTCCTTTGG |
Primers for UN80136 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTTGTTGAGGACGAAACCC | 59.948 | 20 | AGAGAGAGCGCTTCAACAGC | 60.043 | 20 | 171 | 302 | 472 |
2 | TGCAAAAGGGGAAAAACTTG | 60.081 | 20 | AGAGAGAGCGCTTCAACAGC | 60.043 | 20 | 142 | 331 | 472 |
3 | CAAATGCAAAAGGGGAAAAA | 59.916 | 20 | AGAGAGAGCGCTTCAACAGC | 60.043 | 20 | 146 | 327 | 472 |