Simple sequence repeat (SSR)
| >UN80135 AAAAACATCATAAATAACTGAATATATAACCATCAAAGTCAAAACCATAAGTCAATATCTAAAAACCATAGAGCATTGAGCTCATAAGAAACGG CGACACGAAGCAAGTAAACATACAAAGTTCTCAAACTTCAGGCTACACAACTATAGTTAACGCGCGACAGAAAAAAAGGGAAAAAAAACATCTC CAAATCAACGAGAACAATGGCTCCCTCATGGATGCATACTTTACGCTCTTAAGGGTATCTGTTCAAGTCATCAGCATTTAGTTTGTTGAAAGTG GGCGAGCAACACGAGGCCTCACTGGAGTCTTGGAAGGACTCACCCTAATTGGTTGTGTTCCTAACGGCTGGCCACAGCAGTCGAGTGCCATAAT TGCACTTTCTGCCATTACAAACTCAACAAAAGCAATGCGAGTTGAATGAACATTATCCCCCAAAAGCCTCAGACGAGAAACCTCGCCGCATCTT GTTTCAAAAAAATTCTTGACCTCAGTTTGAGAAACCTTCTTGTCAATATTTGTACAGTAGACGGTCCTTGCACACATCTCTCTCTCGTCCTCTG ACCTGGGGAGGAAAGTTGGATTCACAGGAAGGATGGCAGTTTTCGATGGCAAGACCGTAATTTGAGAGAAACCGAGCATTGTACCACAAAGATT AAGTGCTGCCCTTGCAGAGTTCTCATCAGCAAACTCAACAAATGCAAATCGGAGGCGTGAATGTGGGTCACCACAAACTCGACAGTCCAAGACA TGTCCATATCCGCAAAACAAAGCAGCAAGTTGCTCTTCAGTTACATTGTGATCGATGTCAGAGACATACACAGTTCTCTTAATGCTATCTTCTC TTTGAGCCCTAAAAGTCCTCCCATTAGACAGACGTCGGGCGTTGCTGAAGTTACTCCTCCTCCTTCTGTTAGTATTAGGATAGCCTTCAATCCC ATTATTATTGTTATTATTATCAGGATAATTCTTTATATAACCAACAACAGGCTGCTGCACAAAGTAATTAATTGCAAACTCATTTTGATCACGA TTATTATTATTATTATTATTATTTCAGATCTTCAAAACAAGAAGACCTGACTGATACACCCACAATTGATAATTTCCGTTTCTTATTTCCTTCC TTGGTTTTCTTAATCTGACAATTGATAATTTTGTTGAGGACGAAACCCTTGTGAATGAATTGGGCCGGAAAAGAATGCTGTTGAAGCGCTCTCT CTCCTTCCTTTGG |
Primers for UN80135 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CAGGCTGCTGCACAAAGTAA | 60.195 | 20 | AGAGAGAGCGCTTCAACAGC | 60.043 | 20 | 237 | 988 | 1224 |
| 2 | CAGGCTGCTGCACAAAGTAA | 60.195 | 20 | GGGTTTCGTCCTCAACAAAA | 59.948 | 20 | 189 | 988 | 1176 |
| 3 | CAGGCTGCTGCACAAAGTAA | 60.195 | 20 | TTCACAAGGGTTTCGTCCTC | 60.088 | 20 | 196 | 988 | 1183 |