Simple sequence repeat (SSR)
| >UN79900 TTTGCTCCAATATTCAAAACTATATATTAAACCGAATTATGTTCTAATTTACCAATGGATCATCACAACCTCAACCCTAAACCAAAGAATAGAC AAAAATTTAACCATCCTTAAGCTAATTTTACCAAACCACCCTTTATAAAGGTTGACTTTACACTAAAGTCAAACCTACCATCATCTACTCCCTC TTGATAATCTCATGTTTAACAAAGAGTTTTTGTTTTCTTTCATTCTTATAATCCTTCTCTTTCTAGCAGCTGCACAATTTCTAGCCCTTAGATC ATTATCTATAACCATGTATTTACCATGATCCAATGGTTGAGATTTAGACATGAAATCATAAGTCTCTCTCTGGACACGTGGCTCTATCTGATTG AACAAATCAAATCTACTACCACCACTGCTAATGTTACTAGAGCATGACATTGTCATTACTTTGCCAGTGTTTGGATCTACCATGTATTGTTGTC GTTGTTGTTGTTGTTGAGGGGCAAACATGGATATTTGTTGCTGTTGATGATGATAACGTTGTTGAACATGTTGATCAAGATTCACTTTCATAGG ATTACGAGTATGGCGACCATCCGCCGCGTTGCGGCGGCATGTCGTTTCATGCCGTTGATAATTGCACGGTATTTGTAAGCATTAGTGCAGCGGA AGTTGAATCCATTCAAAGTCTGAGTTTATCGCATTTGGTTTTGAACTCCTTAATCAGCATCTGAAGCATATGGTTGCAACCAATGCAATGGCAC GTGCGATCCTGATTTCTGCAGAAGGGATACCCATGTGGCAATGGCAAGAACTTATTGAATTCATCGTTTGGGCTCATAATAAATTAAAAGTTGC TCCTGCTACCCAGCCGAGAGCCTTAAGCTAGAAGACCTTCCTCATAAAATCTGACCCGGTAACTTTGTTCGACATCTTTGGGTTAC |
Primers for UN79900 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TGGACACGTGGCTCTATCTG | 59.855 | 20 | TTATCAACGGCATGAAACGA | 60.073 | 20 | 273 | 353 | 625 |
| 2 | TCTCTGGACACGTGGCTCTA | 59.571 | 20 | TTATCAACGGCATGAAACGA | 60.073 | 20 | 277 | 349 | 625 |
| 3 | TGGACACGTGGCTCTATCTG | 59.855 | 20 | TATCAACGGCATGAAACGAC | 59.548 | 20 | 272 | 353 | 624 |