Simple sequence repeat (SSR)
>UN79562 TTTTTTTGAAACCCAAATTAATAATTAGACGAACATTCAAATATCACATTACATAGTGTATCAAATACTACCAAACGTACTACTTCTAAACCAA AAGTGAATTATACACGAAGTGTAACAAACAGAATCCTAACGAATGCCCCACTTCGTAACAAAATATGTATAATTCACCAAGTTTACCAAATCCA CCGTACTACTTCAAAACAAAATGTGTATGAAACACCAAGTGTACCTTAATCAACAAATGTTTATGCGGACCTGGGAGTTGTTGCTCCTTCAGTT GTGTCAACGCCTCGGCGAGCCTCTCATTTGTTTCTTTCTTCATTTCTTCCTTAAATGTCTCTAATTTTTCTTCATTAAGCTCTCTTTGTTGTTC TATAGCTTCCGCAAAAAACTCCTTGTCTCTCTCTCTCTCGCTTGCTCCAAGTCCTTCACCGATTTTTCTGGCACTTCAACCTCACTTGAATATG CTATACTCGAATGATGAGCATAGAAGCTTAGCTACTGATACTTTATCATGATACTTGAAGCTTAGCTATTGGGACTGACCATTATATTATCATA CATACCTCATCCGAAGATGCCATACTTGAATGATGAGCATAGGGGTTGCCATTACTTGGCGTGCTCGATGTACCCAACAAAGAGGATGAGTGGT TGC |
Primers for UN79562 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCGAGCCTCTCATTTGTTTC | 59.962 | 20 | CCAGAAAAATCGGTGAAGGA | 60.044 | 20 | 151 | 297 | 447 |
2 | GCGAGCCTCTCATTTGTTTC | 59.962 | 20 | AAGTGCCAGAAAAATCGGTG | 60.11 | 20 | 156 | 297 | 452 |
3 | TTCAGTTGTGTCAACGCCTC | 59.88 | 20 | CCAGAAAAATCGGTGAAGGA | 60.044 | 20 | 172 | 276 | 447 |