Simple sequence repeat (SSR)
| >UN78578 ACCTGACAGAAAGTTGATTCGCCTTTATTGCAAGTTCGATACAGCAAACACACTCACTGCTTTTTGCATAAAGTTCTAAATGGGCAAAAAGATA ACATAGGCCATAACCTCTAATTTAGAAAATACAAATTCTAAATACAGATAAACAGCATTTAATATATTTTATATTAGCTATACCATGTAAAACC AAACAGAGTTACCAATTTCAAATTGTGTCGGTTTCTTGGCTCTTTGGTCCTGTATGTTCCTGTGCAGCTTATCATCTGCACCAATATCAGTTCT GATGAGAGTTTGAGAATCTCATGGTATAATTTATGTGATTACTGTAGGCTTTTCCCTTCCCGTAAACTCCTTTAGCTTTGACACAGATAAAGCC AGATCTATCAAGGGTTTTAGTGCCACTTGGGCATCCAAGTCATGTTTTGAGACATCAGGTTCAAACTGTTCTATGTAGATTCTAACAGTTGCAC CTGCTGAACCAGTCCCTGATAAACGAAATATGATTCTTGAGCCATCTGTGAAGACAAATCTAACACCTTGCTTCGAAGCTACACTCCCATCCAC AGGATCCGTATAATTGAAGTCATCTGCAAGTTGAAGAGTATAATCTCCATACTTGTCCCCTTCTTTACTTTTAGAAATCAAATCCCTAAGATAA TTAATCATTTCATTGGCTCCTTCAGACTCGCATTCTTCATAATCGTATCTAGAGAAGTAGTTCCTGCCGTAAGTCGCCCAATGCTCCTTCACAA TGTCAGAGACAGAAACCAATTTCTCTCCAGGTTTCTTGTCTTTGTTTCTGTATGCAATTATAGACAGCCAAGCTAAAACAGCCCAAATACCGTC CTTCTCACGTATGTGATCAGAACCTGTTCCAAAACTTTCTTCCCCACAAATTGACAAAGTTCCTGCGTCCATCAAGTTCCCAAAGAATTTCCAA CCAGTGGGAACCTCGAAGAAAGGGAGATTCAGTTTCTCAGCCACACGATCAAGAGCACCACTTGTTGGCATAGACCGTGCTAAACCCTTTGGGC CACTCTGAAAGTACGGAATAGCTTCTTGTGCATTTGCTGCAATAATAGCAACAGAGTCTGAAGGAGTCACAAAGAACTGTCTACCGAGAATCAT ATTTCTATCACCATCTCCATCACTTGCAGCTCCGAAATCAGGTCCATTGTCACTATACATAATGTTCACCAAATCCTTCGCATATGTTAGATTA GGATCAGGATGACCGTGTCCAAAATCTTCTAGAGGAACTCCATTGCATATTGAATCCAGACTAGCTCCAAGCTTGTCTACAAATATTGGCTTTG CATAAGCACCTGTAACCGCATGCATTGCATCAAAAGTGAGCCTGAAGTCTGGGCGAGAAACAAGATTTTTGATTAGCGAAAAATCAAAGACCTC CTCCATTAGATCCAAATAATCAGAGACTGGGTCAACTATTTCTACACTAAAGTTGCCATATTTTGTAACCCCGACACTAGAAAGATCAACATCT GGAATGTCAGCTACCTTTATTTCAGATATAGAAAGTGTGTTCCCATAAATCAGGTCAGTGATGGACTCGGGAGCAGGTTGACCACTGCTGTAAT TGAACTTAATACCCCAATCATATTCAGGCCCACCAGGATTATGGCTTGCACTCATTATAAAACCACCATTTGCCTTTCTCTTCCTTATAATAGC AGATACAGCAGGCGTAGACAAAATACCTTCCTGGCCCACCAAAACTTTACCAACTCCATTTCCAGCAGCGATTTTAATAATCAACTGAGCAGCT TCTTTATTAAAATACCTTCCATCACCTCCTAATACTAACAACGCATTCTTATAATCCTCCGGTGGCAACGAATTAAACAACGCCTGAATCCAGT TTGCTAAGTAATTCTCTTCCATAAACACTTTAACCTTCTTTCTCAAACCACTAGTTCCGGTTTTCTGTCCTTCTATCGGCTTCGTAGCAATCGT ACTAACCTTTAGATCTTGAAATTCGGTTGTTGTAGATGACGCTTTAATGACGTAAGCATTTTGTCGTGTTTTAAGTGTTTGTGCGGTGGTGAAC GACGGCGAGAAGCTACCTGCGGCAGTTGCACGGGCGACGGCGGTGGCGGTGAGGCGGAAGAGTGACGGAGGTGTGAATATTGACGTTCCGATAC CGGCGGTGATCGGCATTGCTATGTGTGTGTGTGTGAGGGTTTTGATCAGTTACTGTGTTTGTGTGTGTGTTTTTAGTTTGTGTGTTTTTGTGTT TGTGTGTTTGGTAGGTTTGACTTGAAGGAGATGATGATATGCAAGTCCCAATT |
Primers for UN78578 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTTAAGTGTTTGTGCGGTGG | 59.627 | 20 | TTGGGACTTGCATATCATCATC | 59.791 | 22 | 264 | 2044 | 2307 |
| 2 | TAAGTGTTTGTGCGGTGGTG | 60.609 | 20 | TTGGGACTTGCATATCATCATC | 59.791 | 22 | 262 | 2046 | 2307 |
| 3 | TTTAAGTGTTTGTGCGGTGG | 59.627 | 20 | TTGGGACTTGCATATCATCA | 57.478 | 20 | 264 | 2044 | 2307 |