Simple sequence repeat (SSR)
>UN78428 GTACCATCATTCGGGCGATCATATCCTTCTCCTTCCTTCAAGATTTTCTTTCAAACCTTCGATGAAACCAACTCGAGAGTTATCTGGAGGGTAA TGTTTGGTGGCACCACACCGTCATTACCCACTTGCTGGCTCCCTACCATTCTCCCCAAATGCATCTGTAAAGACGTGAAAAACCTTAGGCTGAA TCTTTCTTGTGCAAAAGTCCAACACAAAGGATTCGTCGATGCGGTTTTTGGAAGATCAATATCATCATCATCATCATCAATCTTTCAACTTTTG GTTCTTCAACCTTAACGCCATCATAATCTAACCAAGAACAAAAACCCATAAATCAAATTTTCTTACTTAACCTATTATTGGAATTGGATTTGCA ATGGGTTTCAGATCAAAAAGTGTG |
Primers for UN78428 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCCTACCATTCTCCCCAAAT | 60.011 | 20 | CTGAAACCCATTGCAAATCC | 60.309 | 20 | 253 | 135 | 387 |
2 | CCCTACCATTCTCCCCAAAT | 60.011 | 20 | ACCCATTGCAAATCCAATTC | 59.628 | 20 | 248 | 135 | 382 |
3 | ATGCGGTTTTTGGAAGATCA | 60.448 | 20 | CTGAAACCCATTGCAAATCC | 60.309 | 20 | 161 | 227 | 387 |