Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN78368
CTTTAATATCTAGACACATCACTATTTATTATCCATTAACACGGGTCTAATGCGGCAAAGTTGAAATTTACAAGGGTCGAACATTATGTCAAAC
TCTCATCTCATTATCATCAAAGAAAACAAGGATGCCAAAAGAGTCCTAAAGTGTTACAAAAGTACATACAAGTAATACAGCTGTTATTTCAAAA
TGAGGATTACAAAGCATAAACAACATACGAGATGGAGTTGATAAACTTTTGATCCTGTTACTCAGACGTTTGGTGGTGGCCAGATTTTTCCAAA
TAGCTCTTCGAGCCTCTTTGCTTGGTTGGAATAACCATCCATCCCCGTTGCAAGGAGTTCCAATGCTGCTGGCCCCATTGCTGAAGCAAAGCTA
CGTTGGTCCCACTTCACCAACTCTTCGTCAGTAAAGTTATAGGCTGCAGCCGATTCTGATGATAGTCTTCTGACAAATGTGTATTTGTCATCAT
CAGGAGTCACAGATTCCTTAAGAGCCTGCAATATCTTCAAAGGAGTGATGATGTAATCGACCCCTAAAACATTGAACACGTCTTGCTTGTTCCG
AATTGAGGCAACCATCAATTTTGATTTATGCCCGTATTTGTGAATATAATTGTAAGCTTTTGTCACCAAAGCCAATCCTGGATCTTCTCCTCTT
TTGAGAGCGGCTTCTATCTCAGGATCACCACTGTGGTTGCGGGACCAATCCCTAAGGCGGCCAACAAAGATCTGAATAACCGAAGCACCAGCTT
GAGCAGCAGCAGCAGCTTGGCTAAAGCTGTATACAAAAGTCATGTGTGTTTGTATACCCTCAGACTCCAATAATCTTGCTGCCTCGATTCCTTG
CCAAGTAGAGGGGATTTTAAATAACAAACGCTCTGCAGGGACGTCAATGCTATTGTACAAACGCAACAGGGTTTCCACCTTCCCAACAATGGCA
TGTGTGTCATATGCAAGGCGAGCATCCACTTCAGTTGAAACACGACCAGGCACAAGCTTTGATAGCTCACCACCAACGTTTACCAAAGCCTTAT
TCACAAAACATGTCATTCGAGCATCTGGGGTCTCTAGACCGTAACAGTCCTTATCTGCCAAAGCAGTATCCACAGCACCCTTAAAAGTTGTATC
AGGAAGGCTACAAATTCCTAATAGAAGTGCTGGACTAACAGTGGCAGCAGTTGGAGGAAACCTCTCGAAATCATCGAAAACAACAGTATCTGGA
ACAACTTCACTATAGTGTGACAAAGCATCGAGTTCAGTCCTTCCACCGGTATTAGGATTAGCAGTAAAGTCAGTAAACGACGACGCTTTGATCT
TCATGCATGATCGCCGAGAAGTGAAAACAGTGATCGGAGCTACTGATCGTACTGGTAATCGTGGTCTACTTCTTGTATTGTCCTGAAGAAGAGT
GAATGATGAAGAGAGTGAAGTGGTTGACATTTTTTCAGTTTTTTTAAATCTAGGTGAGAGTGTGTGTGTGT

Primers for UN78368 SSR

Primer pair	Forward primer (5'-3')			Reverse primer (5'-3')			Product
Primer pair	Sequence	Temperature	Size	Sequence	Temperature	Size	Size	Start	End
1	CGGCCAACAAAGATCTGAAT	60.074	20	TCAACTGAAGTGGATGCTCG	59.984	20	263	716	978
2	CGGCCAACAAAGATCTGAAT	60.074	20	TACTTGGCAAGGAATCGAGG	60.206	20	138	716	853
3	GAGCGGCTTCTATCTCAGGA	59.676	20	TACTTGGCAAGGAATCGAGG	60.206	20	191	663	853