Simple sequence repeat (SSR)
| >UN77924 TTTTGAGTGAAAACTGGAAACCAAAGTGTTTTCATAACAGGAGAAAAAAACTATAAGAGGGCTTATAACAAAGTATTTAGAGAGTCAGAAATCA AACCATATAACGTCCTTATGCCGAGTAGTTCAGATTATATACATAAATCACAAAATCAAAGCACCAAATTAAACAAACAAAGAAAGGGCATTTC AACGACCAAACCACGCTCTCGGGTTTTGGCTCTCCACTCCGTCAGTCATTAACTTGTCCAATACCACATTCAAGTCAACCGCCTGACCATTTTC AGTCAACTTCCTAACAGTCGCTCTCACCTGATCTCTTGGGAATCCCATATTGGTCACCTTATCAACTACATCATCAATTGGAACCCTATTCCCA CCGCTTCCAGAACCAGAACTAGAGCTAGAACCCCCACCACTACCACCAACTGCTGCAGCAGTAGGAAGGGATTGAGGCAATATCCTAGCGGTGG GGAGCTGCGGGTAGCCACTTGGACCACCAGGGCCCATGTTAGGGGGAGAATGTTGCTGGGATTTTCGAGGTGACCCATACTGAGAATCACCGTA ATTGAAAGGTTCACCAAACCCAGATGATGGCCCATATTGGCTAGAAAATCCTGAACCAGTCCTGCCGGGCGGTGGTTCGTACATCTGGGATGGG TTACCATGGAACTGCTGTGGAGGTGGGGGGCCACCACCAGGTTGCCGAATGCTCGGTGGATAATTCTGGGATGATAAATAAGACATTTCTTCCG AATGGTGGCTCAATGGTGGTTGGTTTTGAGGGGGATTAGGTTGTTGCAGAGACATGGGAGGTGGTTGAGAATATTGGGTATGAGTTGGTTGATA CTGTGGCTGTGGTGACGGTGGTGACATTTTAGGGGGCTGAGGTTGCTGAGGTGGCGGCATCTGGTACTGCTGTGGTAGTGGTTCAGCGGTTTGA CCAGGTGGTGGGTAGTAAGAATCATGATGGGAGGCTGGCATTGGCATGCTTTGGGGATATTGATTTGGATGCTGGACTGGAGGAGGAGGTGGTG GAGCATTGGGAAGAGTAGGCTGGGGTGGCTGTGGAAGAGGGGCAGGAGGAAACTGTTGGTGAGATTGCGAAGGAGCAGATGCAGCAGCCATTTG GGGTTGGGGTTGGGGTTGCGGTTGCGGTTGTGGTTGCTGCTGAGGCTTTGAAATTTGTACTTGTGAAAGCTGCAGCTGAGTCTCTAGTATTTCT TGCTTATCCTTCACATCCTGTACACCAGCTTGTACCTCTCTAACAATGTTCTCAATCTGCCTCAGTTTCCCATCTGTATTTCCATGGTTGTTAC CAACAGATGTTCTCAAATCATCCACAGAATTCTCCAAGTTCCGGGATCTACTCTCCAGTTGCGAAAGTCGTGCACTGACGCGTTCCAGTTCATG CATCAAATTATCAGCATGTGTTTTCATTGTTCTATCAATCTCTGATATCAGAGCTGCATCTAGGACAGTTCGATCCTTCTCCACATGGACCTTA GAAGCAGGTTCAACAGAATTAAGAGAACCATAGCTTCTGGAAGGAAAATTATTGGTCAAATCAGCAGAACCCCAAGCCCTAGCTCCACCAGATT CAAAATTCAAAGCCTGCGCTGAAGATGAGGTCTTCGGACGAATGGGTTGAAAATCATAACTAGGTAAGATCTCATCTTTTTTATTATTATTATC GTCAACGTCATCGATGACGTCATGATGATGATGATGATGAATGTTATCATCGAGTGAGGGGTAGTTATTAAGATCCATGAAGGAGGAATCGTTG TTATTGTCTGAGTTGGTTTGTGAGGTTTTGAGATCCATGATCTGCTTATCCATAAACGTAGATGTGTTCATTTGCTGGAATTCTATTAATTACG TAGAATTATTATTATGATATCTATTGATGATTGTGGTGTGGTGAATTGTGTTTTGATCAGGATTACTGGTTGCTTCC |
Primers for UN77924 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GAAGATGAGGTCTTCGGACG | 59.803 | 20 | CAACGATTCCTCCTTCATGG | 60.452 | 20 | 168 | 1619 | 1786 |
| 2 | CCCTAGCTCCACCAGATTCA | 60.21 | 20 | CAACGATTCCTCCTTCATGG | 60.452 | 20 | 206 | 1581 | 1786 |
| 3 | AGCCCTAGCTCCACCAGATT | 60.233 | 20 | CAACGATTCCTCCTTCATGG | 60.452 | 20 | 208 | 1579 | 1786 |