Simple sequence repeat (SSR)
| >UN77905 GTCGAATTCTCCAAGCTTCCCGCCAATCACAACTCTGTTTCTATTATCTAGTTTCCGAAAAGCATATGTGCAGGATAATATGAGCCTACACTAA ATTCTAAAGTACAATTGATTACAATCCCCTATGGAATGCTATCTTTCACACCGAGGTTATTCTTGTTGGAATTCTTCCAATGAAGCAACCATTT CAAGATTTCTGGAGAATGCATCTTTCATAAAGAGCCACAAGCTCTTTCTTGTTGGGATTCTTCAACTGAAGCAACTCGGCACCGAAATTATGTT TAGTGAGTTCTTGCTTCAGTTTCAAAACAGTAAACTTTGTGTAATCTTCATTACTAGTGTCTCGACTATGGTTACTGTTCTCCTCCCCTCTATA GAAAGAACCACCATCTTCTGTTGGAACATACTGTAATGGGCTAGTAGTACTTCTGGTCCTCTTATTTCCTCTTACCGCTCTATCTCCATCAACA GAATCAGTACCCATTTCAATGTCTTCAACTCTCACACGTTTTCCATGTGAAGCAGTTCTGAGTTTACTATCTAAAGCAGACTCATTAAGACGGA CAGTAGTCATTTGTTGTTGGAGTAAATCAAGTTTTCCTTGTGTGGCTTGTAGTTGAACCGAAAGTGCTTCTGCTCGATTGGTGGCTTCTGCCCG AGCTGCCCGTTCGGTTTCCAAAAGTGCTTCAAGGACCTGCACAGTACTAGCACGTTGCTCGTTGTTTGATTTTAGTAAATTTTCAATTTCTCTC TCTCTTTGACCGACTCTTTTTTCCAGCATCGTTACTTTAGATACAGCCTCCATTTCAGCAGATCGGTATGTTTCTAAATTTTCAGATAAGTCCT TTGTTTGTCTTTCAAGATTCTCGATACGCCTCTCGGCATGAGCGATTTCAGTTAATCTTTCACCTGCCAACCGTTCGATTTCGCTCTTTTCTTT TTGGGCAGTGACTGCTTCTGCCCGGGCAGTATCAGCCAACTGAGTTGCTCGTTTAGTTTCCTTTTCAGCGATTCTACATCTTTCCTGTACTTCT GCAAACCGGTCAAACTCTGATTGATATCTCTGCTCCAAACGAACTTTTTCTTGCTTGAGAATTTCGGCTTCTCTTTCATAAGATCGAGCCTTGG CATTTGCACTTTCTAGCCTTTCTCCAAGTTCCTTGATCTGCCTTCTCAATGAAGATATATCTGAATCATAATTCTCTATCTTTGACTCTGCAGT CTTCAGTTGCAAGCTCAAAGTAGTTACACACTGCTCAGCATGTTCAAGCTTTGATGCCCTATCTCTCAGTTCAGCTTCCTTATCAGCCAATGTA CCAGCAAATTCTGCCCTAAGAACATCTTCACGTTGTTGCGTTTGTTTATTAGACCGATCTTGCACAGCAGCAGCCTTCTCGAGTGCACTCTTCG CTTCTTTAACAGCAACATCAAACTTACGTTTCCACTCCTGTGCTTCCTCTTGAGCAGACTTTGTTTGTTCGCGTGCAGCTTCTAATCTTGCCTC AGCAGCACTGCTTCTCGCCTTAAGATTTGCTACTTCTGAACCAGCCTGATCTTCTGCAGCTTTTTGCTTAGATAAAGAAAGTTCATATTTTCTT TTCCATTCCATTGATTCATGTTTAGTGGCTTCCACTGTTTTTGATAAACTGGAGCATCTTTCATCCAACGAGCTTGAGTTTTTTTGAAGATTTG TTATACGGGTCATGTAATCTTCTGTGACTTTGTTTTTGTCATTGATTGCATCATCATATCGCTTTAAGTAATCGGATTTGTATGTCTCGCTTGC TTCTAACTGTTTGCTGAGTAATTCCATTTTGCCTTCTATTGAGCGGCATTTCAGATTCAGAGAGCTCTTTTCTGACATGATATGGTCTATTTGC TTCTTGACAAGATCGGGAATTGGACCTTCCAAACTTTGTCGTAAGAATGAAGTTAGTTTCTGCCACTTCTCTGGACCATGAGAGGTTGCTTCAT ACTTTGATATAAGCTGATCAAGAACCTTAAGAACATCATCTAATTTTGTGGAAGGAGCATGACAAAGTTTCCTAAGTTCCTTTTCCATGCTCTG TATGGCATTCGAACATTGCAAGTAAGCCTCCCTGAACGCATTCTTTTTATAATCCTCAAAAGCCTTTTTCAGGAACATATGTAAACGCTTCTCA TACTTCTGCCTAGCCGAACCAGCTCCAACAGCGATGGCATTAAAAGTGGCCACCGCCTTTTGAACAGCCTCTTCATGTGCTTCTCGCATAGCAA CTTCCTCAGGCGGCTTTGAGCGATCAAAGATGGACACATAAAGTTCAGCAGCTGAATCATATGCCCTTTCACACTCTGCTTCTTCAACACTCTG CCATGAGGAGGTAATAGTAGGCACTGCACCATTATTGAGAGCATCTAGAAAAGATTGAGTGATACGAGCAAATATGGGTCCAGTCATAACTGTG GCCCCAACTTGCTTAGGCCTGGTCCTCTCAAAAACAAATCTTGTCAAAGCATCCAGTCCTGTTTTAAACTCTGGCCTCATATTGTCCAACGAAA TCTGGTCAAGTCGCTGGAGCTCGGCCTCATCAGTCAAAGGTCTAACAAGAGTGAAGCAATCTCTATCCGGGAAAAGAGCTCGGATGGATTCTCG AATCTCATTCTTGGCAGTAACATCCCTTCCACCACCGTTAACGGGCCTCAAAGCAATTTCTAGGTAGTCACGAGGTGTTATTTTCCTATTATCC TCAGCCAAATCCAAATAAAAGTCCCTCAAAAGCCAAACAAATATTGGGGAGAACTGGCCAAGCTCAGAGGCTGTAGTCTTTCCCCCAGAAGCTC TAACACGAATGTGCTTAGTCATTTCAGTCACCAGAGAGAGGCGATCAAGTGCAGCTTCATCAATACCTCCCATCTGGTTGTATATGAACATGCT TGATAATAGGACAGCTAAGGAGAAGATTTGTGTACTGTATGTCCCCGTTTGATCATATGCATCGATTCCTTCGCTATCTAATAATAAAAGGTTG TATTCAGTTCCATCAAGAGCTGTTCTCTTTATGGGAGTACTCCACAGCCAAAGCCCTTTGGTACATGGGCGATGTGTTGCTGCCACTTGAAATC CACTACTCCTTCCAAGAAGCTGATTCAGTATAAAACTCTTGCCCTGACGAGCACGACCGCAGACCGAAACGATACCAACAGGCTCCTTAACTAA CTGTAAAACAGCCACGGCTTCTGGATCCATCTGGAACTTTCCTTTTTCATCGCAGTATACTAGACGGATAGCTTTGGCTGGTCCACCGGATGGT GATGATGATGATGATGACGTGTCCTTATTGAAGAGCCTCATCGGTGATGGTTGACGGTGGTGATCGTACGGTTGTAAAGTGAATGGGGGTGTGA GTTGTTGTGTGTGATGCTTT |
Primers for UN77905 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CGAAACGATACCAACAGGCT | 60.132 | 20 | CACACAACAACTCACACCCC | 59.89 | 20 | 229 | 3167 | 3395 |
| 2 | ACCGAAACGATACCAACAGG | 59.853 | 20 | CACACAACAACTCACACCCC | 59.89 | 20 | 231 | 3165 | 3395 |
| 3 | CGAAACGATACCAACAGGCT | 60.132 | 20 | ACAACAACTCACACCCCCAT | 60.135 | 20 | 226 | 3167 | 3392 |