Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN77801
TGATGCTGGAGTTGGATTCTGAGACGGTGCTTGGTTCGGCTGGCCTCCAAACTGGAAGGAGGGCATAGCTGGACTTGGAGCTGGAGCTGGAGTC
GGGGTGGCTGAACCAAACATGAACCCTGGTGAAGCCACGGGGGTTTGACCAAATGCTGGAACAGGTGTCGGAGTTTGCATAGAATCCTCAGCCA
TACTGTCCATACTCATGTGATCGTTATTATTCGGTGTGGCACCAGTTCCAAATACAGGAGTCGGATTTCCAAAAGGAGATTGATTTTGGGTGGG
GGTTGAAAAGGACGAAGTAGTAGCACCAGCACCAAATGAAAATCCTGTTGAACTGCCAGTATTAGATGCACCAAACACCACAGGCGATGTAGTA
GCAGAAGGCGTAGGTGTCGCAGATGCCCCGAAATTAAATGTAGTACCAAATCCTGAAGACTTTGCCGGCTCCCAAGTAGACCCAAATACGCTGG
TAGCGGGTCCACTAGTGGAATTACCAGACTTGCCCTCTGATGATGCAGTCATGGAACTAATACCGAAACTAGATGATGTGCCGATAGCAGGAGC
TGAGGACGAAAAAGGAGAAGTCCCAGAGGTAGAAGATGGGATGGAAGTGGTCCCAGAGCCAAACAGAAAAGGCACAGACGGTGCAACAGCCATT
GATGCCTGTGTGTTTGCCTGAGATCCGTTGGAGACATTAAAGAATGACGCCTGTGACTGATTATTAGTTGTTGAAGTAGCTGCTGGAGAGCTGA
AGCCGAAGAGTCCACTTCCGATGGTGGTGGTGGTAGCAAAAGGTGTGCTAGCAAAGGGCGAGTTGGTCAAGTTGGATTTCAAATCCTTGTCATT
TGTAACATTGGTGTTCCCAGTTTCCGCCACTGAAATTGTTGGTGCTGTTGAAGTAGCAGACCCAAAACTGAAAACTGGAGCTGGAACAGACGAA
GGTATAGCTGGTGTTGGGGTAGAACTAGAGAAGATAGCAGCAGGGGTAGGGGTGGTGGTGGTGGTGCTGGATATAACAGTGGTAGTAATGACAG
TGCTAGCAATACTGGTGGAAGAAACATTTGGGGAGCTAAAATTAGAAAGTGAACTGGTAGTGGCACTAGAAGCTGTAAAAGGAACCACTGATGG
AAATGTATTAGGGTTTGAGAGAGGTGTCGTGTTGGGAGTAGTGCTCACGTTGTTGGTAGAGATTCCAAACGAGAAAATACCATTTGTGGGTGTA
GCTGGAAGAGCAGTAGAGGGCGGAGCATCTAATTTTCCAAATATGTTTGCAGCCTTCTGATCAATTCCATTTCCATCCTTGTTGGACTCTGATT
TCCCAAATATACTTGCTGGCTGCTGATCACTCCCACTTTCAGTCTTGTTGGACTCAACTTTTCCAAATATATTTGCTGACTTCTGATCATTCCC
ATTTTCAACCTTGTTTGACTCTGGCAATTTTACATGGTCATTTGCTGTGACCGAGTTGGAGACACTGGTTGACTCGAGTGCTTTAGGATCTGAA
CTAGCACTTGGTTTACTATCTGAAGGTCCATTGGCAGAAAACGCAAATGGTGACACCCTTTCAGCACTTGTGCCAAACAACTGAAAGGAATTTG
AATCTTTCTCTAGGGCAACATTATCCATTTGCAAGGATTGTGGAAGCAAATTATTTTGTGTATTTGTAGTTAATGGAGGTGATGCAAGAAGCTT
AAACCCTAATCCTTGTTCACTAACAGAACCACCAATGCAAGAAGATACAGGCTTTTCAGCTTCTTTGGGCACAGCCTGTTCTGGAACTTTAACA
ACCTCTGGAAACATTTGTTTATTATTTTCAACCAATGCAGGGGTTCTAGAAACTCCCGGAAGTGTTGAAGTTGCAACGATGTCAGCAGGCAAAG
CTGTCTCTTGTTTATTATTTTCAACCAAAGGTAAAGAAACGTGCCCATTAGTTTGAATCCCATCATCATCATCATCATCATCTAAGTTGTTCTT
TAGAATGTCTATAGAGATCATAAGGCGCCCATAGCTCATCAACAGGACACGAATCACCCGTATCTAGTCTCGCCCACGGTTTCCCTTTCCCACT
CCAATGCAACAAACTAATCGGCCCAGGATGCAACGTTCTACAGCTATGAACCTTGTTGTTCCCACCAAGCCCATGTTGGTTCCATCTGTGATCA
ATCTCCGCAACATCACCACCAAACACCAACAAAAAAGGAGGAAGCGAACCCAAATCATAAATCCTCTCCTCCTTTTGAATCTCCATCCATTTCT
CAATC

Primers for UN77801 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1AGTTGCAACGATGTCAGCAG 60.05620TATGGGCGCCTTATGATCTC 60.02320153 18552007
2AGTTGCAACGATGTCAGCAG 60.05620TTCGTGTCCTGTTGATGAGC 59.83720173 18552027
3AGTTGCAACGATGTCAGCAG 60.05620GATACGGGTGATTCGTGTCC 60.20320184 18552038