Simple sequence repeat (SSR)
>UN77801 TGATGCTGGAGTTGGATTCTGAGACGGTGCTTGGTTCGGCTGGCCTCCAAACTGGAAGGAGGGCATAGCTGGACTTGGAGCTGGAGCTGGAGTC GGGGTGGCTGAACCAAACATGAACCCTGGTGAAGCCACGGGGGTTTGACCAAATGCTGGAACAGGTGTCGGAGTTTGCATAGAATCCTCAGCCA TACTGTCCATACTCATGTGATCGTTATTATTCGGTGTGGCACCAGTTCCAAATACAGGAGTCGGATTTCCAAAAGGAGATTGATTTTGGGTGGG GGTTGAAAAGGACGAAGTAGTAGCACCAGCACCAAATGAAAATCCTGTTGAACTGCCAGTATTAGATGCACCAAACACCACAGGCGATGTAGTA GCAGAAGGCGTAGGTGTCGCAGATGCCCCGAAATTAAATGTAGTACCAAATCCTGAAGACTTTGCCGGCTCCCAAGTAGACCCAAATACGCTGG TAGCGGGTCCACTAGTGGAATTACCAGACTTGCCCTCTGATGATGCAGTCATGGAACTAATACCGAAACTAGATGATGTGCCGATAGCAGGAGC TGAGGACGAAAAAGGAGAAGTCCCAGAGGTAGAAGATGGGATGGAAGTGGTCCCAGAGCCAAACAGAAAAGGCACAGACGGTGCAACAGCCATT GATGCCTGTGTGTTTGCCTGAGATCCGTTGGAGACATTAAAGAATGACGCCTGTGACTGATTATTAGTTGTTGAAGTAGCTGCTGGAGAGCTGA AGCCGAAGAGTCCACTTCCGATGGTGGTGGTGGTAGCAAAAGGTGTGCTAGCAAAGGGCGAGTTGGTCAAGTTGGATTTCAAATCCTTGTCATT TGTAACATTGGTGTTCCCAGTTTCCGCCACTGAAATTGTTGGTGCTGTTGAAGTAGCAGACCCAAAACTGAAAACTGGAGCTGGAACAGACGAA GGTATAGCTGGTGTTGGGGTAGAACTAGAGAAGATAGCAGCAGGGGTAGGGGTGGTGGTGGTGGTGCTGGATATAACAGTGGTAGTAATGACAG TGCTAGCAATACTGGTGGAAGAAACATTTGGGGAGCTAAAATTAGAAAGTGAACTGGTAGTGGCACTAGAAGCTGTAAAAGGAACCACTGATGG AAATGTATTAGGGTTTGAGAGAGGTGTCGTGTTGGGAGTAGTGCTCACGTTGTTGGTAGAGATTCCAAACGAGAAAATACCATTTGTGGGTGTA GCTGGAAGAGCAGTAGAGGGCGGAGCATCTAATTTTCCAAATATGTTTGCAGCCTTCTGATCAATTCCATTTCCATCCTTGTTGGACTCTGATT TCCCAAATATACTTGCTGGCTGCTGATCACTCCCACTTTCAGTCTTGTTGGACTCAACTTTTCCAAATATATTTGCTGACTTCTGATCATTCCC ATTTTCAACCTTGTTTGACTCTGGCAATTTTACATGGTCATTTGCTGTGACCGAGTTGGAGACACTGGTTGACTCGAGTGCTTTAGGATCTGAA CTAGCACTTGGTTTACTATCTGAAGGTCCATTGGCAGAAAACGCAAATGGTGACACCCTTTCAGCACTTGTGCCAAACAACTGAAAGGAATTTG AATCTTTCTCTAGGGCAACATTATCCATTTGCAAGGATTGTGGAAGCAAATTATTTTGTGTATTTGTAGTTAATGGAGGTGATGCAAGAAGCTT AAACCCTAATCCTTGTTCACTAACAGAACCACCAATGCAAGAAGATACAGGCTTTTCAGCTTCTTTGGGCACAGCCTGTTCTGGAACTTTAACA ACCTCTGGAAACATTTGTTTATTATTTTCAACCAATGCAGGGGTTCTAGAAACTCCCGGAAGTGTTGAAGTTGCAACGATGTCAGCAGGCAAAG CTGTCTCTTGTTTATTATTTTCAACCAAAGGTAAAGAAACGTGCCCATTAGTTTGAATCCCATCATCATCATCATCATCATCTAAGTTGTTCTT TAGAATGTCTATAGAGATCATAAGGCGCCCATAGCTCATCAACAGGACACGAATCACCCGTATCTAGTCTCGCCCACGGTTTCCCTTTCCCACT CCAATGCAACAAACTAATCGGCCCAGGATGCAACGTTCTACAGCTATGAACCTTGTTGTTCCCACCAAGCCCATGTTGGTTCCATCTGTGATCA ATCTCCGCAACATCACCACCAAACACCAACAAAAAAGGAGGAAGCGAACCCAAATCATAAATCCTCTCCTCCTTTTGAATCTCCATCCATTTCT CAATC |
Primers for UN77801 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AGTTGCAACGATGTCAGCAG | 60.056 | 20 | TATGGGCGCCTTATGATCTC | 60.023 | 20 | 153 | 1855 | 2007 |
2 | AGTTGCAACGATGTCAGCAG | 60.056 | 20 | TTCGTGTCCTGTTGATGAGC | 59.837 | 20 | 173 | 1855 | 2027 |
3 | AGTTGCAACGATGTCAGCAG | 60.056 | 20 | GATACGGGTGATTCGTGTCC | 60.203 | 20 | 184 | 1855 | 2038 |