Simple sequence repeat (SSR)
| >UN77800 TGATGCTGGAGTTGGATTCTGAGACGGTGCTTGGTTCGGCTGGCCTCCAAACTGGAAGGAGGGCATAGCTGGACTTGGAGCTGGAGCTGGAGTC GGGGTGGCTGAACCAAACATGAACCCTGGTGAAGCCACGGGGGTTTGACCAAATGCTGGAACAGGTGTCGGAGTTTGCATAGAATCCTCAGCCA TACTGTCCATACTCATGTGATCGTTATTATTCGGTGTGGCACCAGTTCCAAATACAGGAGTCGGATTTCCAAAAGGAGATTGATTTTGGGTGGG GGTTGAAAAGGACGAAGTAGTAGCACCAGCACCAAATGAAAATCCTGTTGAACTGCCAGTATTAGATGCACCAAACACCACAGGCGATGTAGTA GCAGAAGGCGTAGGTGTCGCAGATGCCCCGAAATTAAATGTAGTACCAAATCCTGAAGACTTTGCCGGCTCCCAAGTAGACCCAAATACGCTGG TAGCGGGTCCACTAGTGGAATTACCAGACTTGCCCTCTGATGATGCAGTCATGGAACTAATACCGAAACTAGATGATGTGCCGATAGCAGGAGC TGAGGACGAAAAAGGAGAAGTCCCAGAGGTAGAAGATGGGATGGAAGTGGTCCCAGAGCCAAACAGAAAAGGCACAGACGGTGCAACAGCCATT GATGCCTGTGTGTTTGCCTGAGATCCGTTGGAGACATTAAAGAATGACGCCTGTGACTGATTATTAGTTGTTGAAGTAGCTGCTGGAGAGCTGA AGCCGAAGAGTCCACTTCCGATGGTGGTGGTGGTAGCAAAAGGTGTGCTAGCAAAGGGCGAGTTGGTCAAGTTGGATTTCAAATCCTTGTCATT TGTAACATTGGTGTTCCCAGTTTCCGCCACTGAAATTGTTGGTGCTGTTGAAGTAGCAGACCCAAAACTGAAAACTGGAGCTGGAACAGACGAA GGTATAGCTGGTGTTGGGGTAGAACTAGAGAAGATAGCAGCAGGGGTAGGGGTGGTGGTGGTGGTGCTGGATATAACAGTGGTAGTAATGACAG TGCTAGCAATACTGGTGGAAGAAACATTTGGGGAGCTAAAATTAGAAAGTGAACTGGTAGTGGCACTAGAAGCTGTAAAAGGAACCACTGATGG AAATGTATTAGGGTTTGAGAGAGGTGTCGTGTTGGGAGTAGTGCTCACGTTGTTGGTAGAGATTCCAAACGAGAAAATACCATTTGTGGGTGTA GCTGGAAGAGCAGTAGAGGGCGGAGCATCTAATTTTCCAAATATGTTTGCAGCCTTCTGATCAATTCCATTTCCATCCTTGTTGGACTCTGATT TCCCAAATATACTTGCTGGCTGCTGATCACTCCCACTTTCAGTCTTGTTGGACTCAACTTTTCCAAATATATTTGCTGACTTCTGATCATTCCC ATTTTCAACCTTGTTTGACTCTGGCAATTTTACATGGTCATTTGCTGTGACCGAGTTGGAGACACTGGTTGACTCGAGTGCTTTAGGATCTGAA CTAGCACTTGGTTTACTATCTGAAGGTCCATTGGCAGAAAACGCAAATGGTGACACCCTTTCAGCACTTGTGCCAAACAACTGAAAGGAATTTG AATCTTTCTCTAGGGCAACATTATCCATTTGCAAGGATTGTGGAAGCAAATTATTTTGTGTATTTGTAGTTAATGGAGGTGATGCAAGAAGCTT AAACCCTAATCCTTGTTCACTAACAGAACCACCAATGCAAGAAGATACAGGCTTTTCAGCTTCTTTGGGCACAGCCTGTTCTGGAACTTTAACA ACCTCTGGAAACATTTGTTTATTATTTTCAACCAATGCAGGGGTTCTAGAAACTCCCGGAAGTGTTGAAGTTGCAACGATGTCAGCAGGCAAAG CTGTCTCTTGTTTATTATTTTCAACCAAAGGTAAAGAAACGTGCCCATTAGTTTGAATCCCATCATCATCATCATCATCATCTATCTCAAATGA ATCATCCTCAGGTGCACTCATCTGAAATGCACGCTTCTTCTGAGGAGGTTCAGCTGGAAGCTTTAAGGTTGGCTCATTAATTCTAACAGCTGGT GCTTTATCTTTTGATGTAACTGATAACTCACCATTGACAGAGGTCATCATGCTACGAGGAATTGGGAACTTCCTTGATCCATTATCTTCAACTT TTTCCTTGCCTTTGGAGGTCAGCTCTCGACTATCATGTAGCCTTTCATGGTGATGAACCTCTGATTTCTGATTATCGAGAGGGTAAGAAAGCAA TTTCGGCGAATCCACCTTCTCCAAGCTTCTAAGAGCCTGCCCATGGAGCATATCTAACGTCAGTTTCGTGGGGGATTTAGTTAAGCCTGAACTT TTTTCCTTTGGACTCGGTTTTTCAAGGTGCTGCAATATTTTTGTGGCTGTTTGAGTGGACTTTGTAGGAACATTAGCGTAGCCCGAGACCGATC CCGTACCATGCATGCTTGTGTATCTATTTTCTTCAGCTCCCTTAACAACTTTTGGTTCAGACTCGTTCATTAAAGGGAGCTTCTGACTTGCGTG GTCTGGCTGTTGAAGTGACGTGTATCCGAGTTCTCCTTTATCTCTTAATGTTAAGAGATTAGCTTTCTGTCGAGTTCTACGCAGTGGACCACCC GATCCAATATCATCGTCTAGTACAGAGCTTCTACGTTTTAGAGCCATTTTCCCTCCATGCTGAAAGGCAGACTGAGAAGAAGTCAAAGCTTCAT CACGGCCATAACTTGATGTGATTCCCTTTTGGGTAAAAGTTGAAGGAGATCTGGCATATGGTGTGCGGGCCATGCTGTACATTGCCGATCTGCC TCGAGATCTTGGTGTTGTGAATCCATTTTCAAACCCCGTGGAGCCATTTGCAATTTTTGGAGCAATTGATGTAATTGGTGATTTTGAAAAGCTC GTTGCATTATTATGCAGCACTATATCTTGTCTCAGTGCTACCTTAGTAGGCCTGGAACCCATGTATGCCTTTGCCAGCTCAGCAGGAGAGGCAG TATCCTCCTCAAGAACTCTTGAAGTGACCATAGGCGTGGAAATAGCAGCATGTAAGTTATCCCTCTCATCTCCATGTTTTTGCAGCGAGCCACT TGTTGACGCTTCAAGCCTTAGAAGAGAAGATGGTGAACTATACGGATTTACTCCATCCCGTTCAACAACATCAGCAGAAGATGACTCGGTCCTT GAATGCAACAATGCTGTCAACCGTTCGATTTCAGACCTAGTAAAGGTTTTTTGTTGCAACATTTGTTCGAGATCCGATATCCCAGTAGCAGCAG AAATACTGGCAGAATTCCCGTGTTGCCCTTCCTCCCGAGGAAGATTTTGGGGTTCTTCATTAATCTCTGAGGGGCGTTGTAACGGCAAAAACAT ATTCCGGTTACCAAAAACCACACCAAAAAGCTTATTAGCACCAGCATACAACAGCCTAGACGCAGGGTCAACGATTTTGGTCAACAAGTTCGGG TTTTTGTTCCTGATTGCGGTAGGAGGCCGTGCGTACGGTGTGTTTCTCCGTCGGAGAGGTGTTTTGCGGAGCTTTCCTCCAGCGGATGCGGTGG TTTGGTAGGGAGGTGGTGTGTCACGCGCCG |
Primers for UN77800 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | AGTTGCAACGATGTCAGCAG | 60.056 | 20 | CAGATGAGTGCACCTGAGGA | 59.98 | 20 | 144 | 1855 | 1998 |
| 2 | AGTTGCAACGATGTCAGCAG | 60.056 | 20 | CAGAAGAAGCGTGCATTTCA | 60.134 | 20 | 162 | 1855 | 2016 |
| 3 | AAACTCCCGGAAGTGTTGAA | 59.569 | 20 | CAGATGAGTGCACCTGAGGA | 59.98 | 20 | 163 | 1836 | 1998 |