Simple sequence repeat (SSR)
| >UN77344 TTGGCTTTTAAATTTTGAACATATATCAAAACTCAAACTTCAAACATACAAATAAAATCAATACCCGTTACCAGATTGTACAAGCAAGACCTTT ACTACTTACATTATCATATACTTCATGACAAACTTGCGTTTGTATATTGCGGCCTGGTGTGAGACTTCAAGCTTTTATACATATGTGAGCAGGA ACGAGAAAATTCCGACATTGCCCTGAAAACCTCTGGCAAACCCGTCTTCAAATTCATCAAAGACTTATCCCTTACTTGAATACACTGCCTCTGG TACGCTTCTTCTTCCTCTTCCAATCTCTTCTTCAGTAAATCAACTGTAATCTGCTGATCAGCAATCACTTCCTTATCGTTGTCCATATCATCTG ACACTCTTTTTTGCATGTATTTATTGTACCAATCTTCAAACTTCCGTGTTTTTCGTGCTAATTCCCTTCTTGTTTCTTCACAACTCTCTTTCAT CTTCATTTCTTCTGTTTGGTATTGAAAAATTGTGTCCATGACGGCCGCAAAGTTGTTAATGGCAGTTCTTGCCCCTTCTTCTGGGAGCTTCTCG AGAAAATCATGCCAGGTTCGTAAAAGGATTTGAATCGGAGGAGTTTGAGGTCTTTGAGGTGACGAGACTTTTTCTCTGAGGTTGTTGTCGATTG GGATAAGGTTGAGTTTTAACCAATCGCTGAGCGATTTTATGTATTCTTTCTGGTGTTTCATGAGCTTTTCAAAGTTTGAATGCCACATTTGGAC ATGAATGTGAAGTTGACGTGTGTTGTTGTAATGGTGTTCGCTAGTTTCTGTTGGTGCACGGGAGATATCAAGCGATCTTAATGCCTGCACGATT TTTGATTGGTGGTCATGTTGATATTTCATGTTTTCCCACATTATGGCCATCCCGTCAACGAGTTGTACAAGTTTCGGGTACAATTGCTCATCAC GAAGACGGTTAATTTCTGACACAGTGGAATCCATTGATTGCATGTCTACGATGTATCTCGTGTGTAGGTGACTTACTGTTGCTTTTGTCCTCTC CAGATGATCAGTGCTGGCACCACGTTTCTTAAGTCTATTTAGTGAAGCAATCTTTTTCTGGTACTCGAATTTCATCAATTCACCTGCCTTCACT TCATCGTATAGCTTCTTCTCCCATGCTAGCATCTTGTCCAACACAGTCGCATGAGTTTCATTCTCTTCAGAATCAAAATCATCCTTCCTATCAT CAGCCTCCGGTAGTCCCTTAAACGACCTATTCCAGGTAATGACACGCATTACTCTTGCAGAATGATCTATATGGCCTCGATTATCAGCAAAATT GGAGTGATAATGCAATCTATTAGCCTCAAGCATTTTCGAAACCTCATTAGCACTCTCAGACGCTTTCAAAAAACAATCATCAAGTTCCGTAAAT ATCTGCAACAAATTCAAACCATGTCCACCACCACCACCACCATTCTTCCCACTCGATCTCCTCACTTCCGTCGGAACCGGCACCGAAACCCTAA CCTTCTTCACAGCTTTCGGCACCACCGGCGGAGGCGGCGGCTCTTCCACCACTTCCGC |
Primers for UN77344 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CCTATCATCAGCCTCCGGTA | 60.051 | 20 | AGTGAGGAGATCGAGTGGGA | 59.792 | 20 | 262 | 1215 | 1476 |
| 2 | GGCCTCGATTATCAGCAAAA | 60.175 | 20 | AGTGAGGAGATCGAGTGGGA | 59.792 | 20 | 182 | 1295 | 1476 |
| 3 | CTTCCTATCATCAGCCTCCG | 59.79 | 20 | AGTGAGGAGATCGAGTGGGA | 59.792 | 20 | 265 | 1212 | 1476 |