Simple sequence repeat (SSR)
>UN77215 GTCAACACTTCCATATATTCAACAAATTACAATGAACAGAAATGTTTCTGGACCAATGTCACTTTATTGATCATTTCTTGATTCAAACATTGTT CTTCCATTAGTAAACATGACACGCTTTGATTATGTCATTAATTTCATCATAGATCTGAATTTAGAGTACATACAGATAAAAACAAATGAACTCA CAGCTCAACACCATCAGGTATCAACACGATAGAGCCAGTGGTCTTTCGGCCTTCCAGGTCCAAATGGGCTTGAGATGCTTGAGATAGAGGGTAC TTGTGGTTAACCCGAACACGTAAAACCCCAGTTGCAATGTTGGCAAATACCTCACCAGCAGCTTCAAGTAGCTCGTCTCGTTTGGCAGTGTATT GCATGAGAGAAGGCCTAGTTAAGAAGAGGGATTTTACAGCAAGTGCTGATAAAGGTACCGGGTCTGGTGCACCAGATGACTGCCCAAAACTGAC CAGGTGTCCTCGGATCTTTAAGCAGGCTAGTGATCCCTCAAAGGTATCTTTCCCGACAGAATCATAGACTACTTCCACCCCTTCACCTGCGGTG ATCTCAGTAACGCGTTCAACAAAATTTTCTTCTTTGCTGACGATGACATGGTGGCACCCATCTTCCTTGGCTTGTGCAGCTTTCTCTTTGGTTG AGACAGTTCCAATAACAGTCGCTCCAAGTGCGTTTGCCCATTGACACAATAACGATCCAACACCACCTGCTGCTGCATGCACAAGGATTGTATG TCCGCGTTCCACCTTAAAGCAACGGCATAGTAGGAACTGAGCAGTCATTCCCTTCAGCATAACAGACGCTGCTACACAGGGGTCAATAGAAGAA GGGACAGGTACCACTTTATCTGCAGGAAGTATCTGCTCTTCAGCATATGCTCCCATTGGAGTCCCAGCATAAGCAACAATATCTCCAACTTGCC TGCCGGTTAGTCCAGGACCAACAGCCGTTACAACTCCCACTGCCTCCATACCTGGTGTGAACGGAATTGCAGCTGCCTTGTAAACACCTTTACG GAAATAAACATCAATAAAATTCACCCCAATGGCCTTGTTCTTCACTCTAATCTCTCCATCTTTTGGGTTTCCTAGTTCAATGTCCTCCCATTTC ATGACCTCAGGACCACCAAGTTCATGAACTCTAATAGCTTTCACCATACTAGCTAATGATGTTGATGATGATGATGAAATAGCTTTAATATTTA CAAATTTGGGTTTTATGGAGTGTTGATTAGTGAATTTAGTAGTAAGAAAAGGGTTTAACAGCTTTGATG |
Primers for UN77215 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATGACCTCAGGACCACCAAG | 59.962 | 20 | TCAACACTCCATAAAACCCAAA | 59.357 | 22 | 120 | 1129 | 1248 |
2 | TGCAGCTGCCTTGTAAACAC | 60.058 | 20 | TCAACACTCCATAAAACCCAAA | 59.357 | 22 | 241 | 1008 | 1248 |
3 | TCCTCCCATTTCATGACCTC | 59.862 | 20 | TCAACACTCCATAAAACCCAAA | 59.357 | 22 | 132 | 1117 | 1248 |