Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN77201
CGCTAGAATTATGAAATAACAGAGATGGAAGAAACGATACCCAAATTTTATAGGCCTTGCTTTCTTCTTCATTCTTCTGCTTTTCCGCCATTAG
AACAAGCTTTCCAAATTATCTTTGAACCCAAAAGAATATAAAATTTGAACATGTTTTGCAACAAAACATTTCCCACATGCCCGTTATACCACCA
ACCCACATGAAAGAACGAACCAACGCCCCAAAAGAATATATACTTATATCTAGAAATAAGTTTGTTTCGTCAATATCTAAGTGAAAATGAATAT
GAATTCATCTCTTTGCTTAGGCTACGAGCTGATCAAGTTGCATCTGCTCGAGCCACGCACCTATTACTGAATGATCAGTTGTTTCACCACGTGA
AAGGTCCTCACCGGATGGTCCACCAGCACCACCATTACCATTATTACCGGAAGCCGGTGGTGCATCAGCAGACTTGTTTTTCATCATCTCGGGT
GGTGATTCTTTCACAAGTGATTGTACCCATGACAAATCAGGCTCTTCCTCACCGTCATTTTTAAGCTCAAATGAAGATGACCTTTTCAATTTAC
CAAACTCATCTGCGTTAACAGACCAATCCACTTTCCCAGTTGGAGATCCCCATTTTGACCAAGAAGATGAAATATTATTATTATTATTCACAGG
AGACCCGACATTAAAAGGAATGTTAGTTCCAAGTTCCCTTGAGCTGAGACTACGCAGCTGCTGATGCTGCTTCTCACGCTGTGCAAAAGCAGAA
AGACGAGCACCCATTGGAGATATTGGATCCATGCTTCGTGGAGACATTCTTCCAGGTGATGAAACGCCAAAAGAAGCCTGCAATAAAGCATGGT
CAACGTTCTTTGGAGAGAACACATTTGTATTTATAGGTGAAAGCATGCTCTGCTGCTGTTGAAACTGGTTGAGAACCGCTGATTTGTGTGACGG
CGAAAAGACACCAGAAGATGCAGCCTGGTCAGAGTATCGCGGTGAAGAAGTAAGCTCAGCCGAGAATAAATCTTCAAGATTTGAAGGAGCAAGT
GTTTTAGAGCGGCTACAGCGGTTTAAGGAGAGTGAACCAGGCCGTGATTGTGAGAAACATGCATAGTCATTTAACATCTGAGACTCGAAATCCT
GCAACATGCTCAAATCATCTGGTGGAATATCGCGAGCACTGAGAGAAGATCTGAGCCGACTCGACTGTAGGTTGCTTCCCGGAAGATGGAGTGT
CGGGACATTTGGCTGAGGCCAACCAACCGGAGAGTGTGGACCACCATTTCCTGATGGGGACATCTGTTGATTGAAACCAGGAGACATCATCGAG
ACTGACGAGGGTGAACCAGGCAGAAGGTTCAAAGCTGCTGCCATATCCATAACACTAGCACCAGCAGCAGACGACCTAGGAGACGGGACAGCAG
AGCCAGTAGACACATACAACGGCCTAAGCTCTTCCGGAAGATGTGCAAAGAAGCAAACCCGTCTAGCACAGCTTGTACCATCTTTACACAGACG
GGTACGGTATTGAGCAGGGTGTAGCCAGCATTCAAACACACCATGAGCGTATTCACACATATCCCCACGTCTACAAGCACCTTTCCTAAAATCG
GGGCACGGCACACAGCTATAATGATACTTCCTTGGATCCCTTCGTCGTGCATTTTCTCCCGGGTGAACAAAAGGGCACTCGGTCCAATCATGAG
AATAAGCTCGTGAACAGGGTCGAACCTTGAAAGAAAACATCCGGAACTCATCAGTAGAATAAATGCTGTTTTTAATGTCCGGGAGAGACGGGTC
AATTGGGTATTCTTTTTTCTCTGAAGTGTAGTTCACAGGAGTGTCGTTAAATTTTGACATCGTTGGAGACGACACCAACTCTGACGGAGAACAA
GGAGACCCGTTCTCTGGTGAAGACGATAGTGTCGGGGACCATGAGCTTGACGTCGCCACAGATACAGTCAGCTTACAATCACCAAGCGATCCAT
CCGAAGCATTACTCATAAGCATCTCTTCAAGCGAGGCTCGGACCCCCGACAGCTTCGGAGGCACAATAATCACATCAACCGGCCGATGCCCATT
AACATCCTCAATATTCGGATCAGCACCAACAGACAAAAGCACCTTAACAACCTCAACAGCATCAACCGACCCACCAGACGCCGCACAATGAAGC
GCAGTACACTTATCCGGTCCACACGCGAAATTCACATCAACCTTGGATTTCTCCACAATCAGCTTCAAAACACTCAAACTCCCATAAGTAGCAG
CAACCATTAACGGCGTCCGATGCTCTAACCCAATCTGCTTCGACCCCTTCTTCCTTACATACCAAAGCCCAACCTCATCAATAGCCGAGTCATC
AGTCTCAATAGAGCGTTTAAAACCCTCGAAGTCATTGTTAGCTGCGTACTCAAGTAAACTCGAAAAAGAATCTCCGGTCTCCACGGTTAGTGGA
CTCATGACCATCTTGTTAGATTTTTTCTTATCTGTTGTTAATTCGTTCGATTCGGTTGACGATGAAGCAGTATTATTATTCTCTTCAGGGCCAC
TACACATTCTTCAAACAACACACGAGAAAAAATTAGTTAGCTGATCTAGAAACCCAGATCTGTTATATAAAATGTAAAAAAAACAGAAGATTTA
T

Primers for UN77201 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TCTCGGGTGGTGATTCTTTC 60.0520CTCAGCTCAAGGGAACTTGG 59.98220244 463706
2ACCCATGACAAATCAGGCTC 59.93420CTCAGCTCAAGGGAACTTGG 59.98220212 495706
3CCCATGACAAATCAGGCTCT 60.07320CTCAGCTCAAGGGAACTTGG 59.98220211 496706