Simple sequence repeat (SSR)
>UN77010 GATCTCCATCTTTAATTATATTCAAACCAAAAGCCCAAAAGGCGAATTCAGAGTACCGTTTTCTTTCCATTTTTGCTTGTTGATTTCAATTGAA TTGTGGTTGTTCCAACCATGGCCAAAAGCCCGATTGATCTTCCATACCAACAAACATGCTGCTAAAACATTCTTCTTTAATGGTACTCGACTGG TCGAGTTTTTGGCAATGAAGTTGATGATCTGCTGGCCTTGATGATGAATTGTGGAAAAGTTGATGAGCCACAATGTTATTTGGGTTAGGCCTAT CGATATTGGACGATGGAAAAAGATTAGGGATCGGTTGTTGATGGTGTTGGTGTTGATGGTGTGACGATAAGGGGCTATCGTTGGGTGGTGTTCT TGAGATATCTAGCTTGATTTCAGAGCTGTTTTCACTTCTATTGCTGCTCGATCCTTCGGTTTCTTTAACGTTGAGGTTGATTAGTTCTGTTGGC TCCCTATTTTTAAGTGCCATTATCTCAGCATGAAGTTTATGATTTTGAGATTGGAGGGAATCATTCTCAGCTTTAACAGCATCAAACTGTCTTT TGAGAGCATCATAGTCTTTTTCCAACTGTTTAGTTTTCCATCTAGCTCTTCTGTTTTGAAACCATATAGCAATCTGTCTTGGTTGAAGTCCAAG TGCTCTTGCAAGCTGCATTTTTCTTTCAGGTTCAAGCTTATTGCCCAACTCAAAATTCCTCTCAAGTGTCTTCACTTGTTCCATATTTAACCTC CTCTTTTTCTCTCCTGCTAGCAACTGTGATCCATCATCTGATAATTCATCTTCACCATTCATGTTTCCTTCTTGATCACATCCATCTATGTTGT TCATACCCGAATACGACATCGATCTTTTTCCCAAGAAAGAAGCCACACCACTAAAATCTTGAGTGGTGGTGCAAGGTTGGAGAATTGGAGAGAG AGAAGTAGGGGCATGATGGTCATCTTCTTGGGAAGATTGTAACATAAAATTGTTGGAGAAGAAGGCCATTCCAGTGCAAGTCATGAGCTAATTA ACTCTATATAGCTTTGATCATATGACTTGGGTCAACATTTCAATAAGTTTTTGTGGTCTCATCATCATGTTTGATAGAGATCTAGAAAGAGAGA GAGAGAGAGAGTGAGAGGAGGTGTGAAGAATATTATGGT |
Primers for UN77010 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGGCATGATGGTCATCTTCT | 59.893 | 20 | ACCATAATATTCTTCACACCTCCT | 57.231 | 24 | 219 | 949 | 1167 |
2 | ATTGTTGGAGAAGAAGGCCA | 59.67 | 20 | ACCATAATATTCTTCACACCTCCT | 57.231 | 24 | 179 | 989 | 1167 |
3 | GCAAGGTTGGAGAATTGGAG | 59.67 | 20 | ACCATAATATTCTTCACACCTCCT | 57.231 | 24 | 251 | 917 | 1167 |