Simple sequence repeat (SSR)
>UN76972 TTGCCCGCGCGTTGCTGCGGGATGCTATCACACATTCAAAAAATTGCAAAAGCGCATCAATTATAAGTGTAGCAGCACTTACAGCTTTCATATC TTAAATTAAATTAAATTAAATTAAAACTCTTTTCTGTTTCTTGTCCAGTCCTCTCCGTAGATAAAGTGCTTCAACAAATCGTAAAGAATTGGAC TACGCCACTCTATTTCTTCCATCTGCTTCTTGTCCTCTGCACCCGGATTCAACAAACATCGCAGTCCTTTGCCTCCATGGTTGGTTCCAGTTAG TCCACCCTGAAGGGTCTAAAATGTTGTTAATGTCACAATATGAGTACATCAGCCTCGAATAATTTCACCATGCTCTCTCCAAGTAGATTGCCCC TTCATTTCCTTGGTTGTAATTGACAGAGGTTCTTTAGTAGTTACATGAGTCTCAATATTCCCAGACAGAAAGTATTAGATTTGTATCCTACTTG TATTCTTTTATATATGACGGTTCTGACAGCGGTAATGATTAGCCTGCAAACAACTAATATCTCTTTTAGCTTCTCATCATACCCCTCTTTTGCA TCATCTT |
Primers for UN76972 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAAAATTGCAAAAGCGCATC | 60.213 | 20 | TGCAGAGGACAAGAAGCAGA | 59.855 | 20 | 191 | 39 | 229 |
2 | AAAAATTGCAAAAGCGCATC | 60.213 | 20 | ACGGAGAGGACTGGACAAGA | 59.835 | 20 | 114 | 39 | 152 |
3 | AAAAATTGCAAAAGCGCATC | 60.213 | 20 | AACTGGAACCAACCATGGAG | 59.82 | 20 | 242 | 39 | 280 |