Simple sequence repeat (SSR)
>UN76679 AGAGGCACCAACGTTACATACAAATAACATAATGTATGTCAGGTTAACACAGAAAACCAAAAAAGAAGCAACTGCTGAATCTAAAACTCGGAAT CATAATGTAAACTATGCACAAAAACTGACAAATGCTGGCCTGGTCTGATCATATAATGGCTATAGGCTATAGTACAAAGTATGCTATGGATCCC TATGGTGAACACAAAAGCCACCTCAAGAGATAAATCGGGCTTTGGTCACCACCTTCCAAGACGTGGATGAAAGGCCAAAGAGGGTCATCAAGAA ACAAAACAATGTACATATCTGCCTACACGTGTACGTGTGGACTTCAGTCCTCCCTTTCCCTAAGCTTGAAGAAAGCTTTATCAGCATTTGCAAG CCGATCTTGGAACAATGCCCACTCGCTTCTGCATCTATCTCTGACCCCTTTCCATGGAGCTTCACCGTTCTCAGACTTGCCCTGGCTCCCCAGT GAAGGAACAACTTGGTGAATGATCCATTGTGAATCAACAACACCGATTTTCTCGTGTGCAGGCGTTACGCATCTTCTAAGTGCAAAATCTAAAC CCCATCCATGCACCAAATCATTCTGAATCATATGCCACACACACCGCCATGCTGTCCGAGAGAATACAGGAGCCATAATCTCTACAAATGCTGC ACATGGAGGCAAATGAGGATCACTGCACCATCCCGGTTTCTCGTCTGTGTCCTTGTGAACTTCTTTATCACCTCTCCTCTTTGTCATTTGCCAA GTTAATCCATTATTGGGTTCAAGACCAGGCTGAGAAATCTCCAAACCATGTTTCTTAACTAAATTAATATACTTGTCGGCATTGAAGTGTTCAA CACCAAGATCTTCATCCCATATAAAAATATACTCATATGCTGCTACAATATCTGGATGCAGAAACCTCTTTGCATACCACCATTTGGTTTGCTT CTTTACGCTAATATGTATTGCCTGCTTTGACCACTCGTATTGATCCCACTCCGTAACTAGACCATCATAGTGAAAAAGTAAAATTTGGAAATCC CCAGAAAACTTTTTGATTGATTTATCAATATTATCCCTCTGACCCCAACCAACAGTGAAAGTTACCAAGTACTTTGGCTTCTTCTTCAAATCCT CACTAGGTTCGCCCCATAATCTTCTCAAAAATAAGTCGGTCTGTGGGACTACAATTCCTGGAGGCAATGACTCTGCACCACGAGGATTTGTTGG AACATAGATCTTAGGTATTTCAGGTGTATTCCCCGAACCAAGATTTTCAGGGAAACTGCGCTCACGAGATTTAGATTGATCTTCATGCAAGGTT ATATCAAATGGTGAATATATACTTGAAGGTAAGGTGACCTTGGTAAGAGAAACAGATGGAAAAGAAACACCAATAAAATATCCGACGACAATTC CCATAATTGTAGTTATAACTAGTTTTGCACTACCATTCGACTTCTTGAAAACACCACTCCGATACATTCCTTTCATTGTGTTAACAGTGCCCAA TGGCAAATGTCAATCTCTAGGAAATTATGTAAATAATTCTTTATGGATTTACAGCGTCCTCCGGTATACTACAATGCAAAAGTTTTGAAAAGGG CTAGAATACAGGTTTTAGGTGACTTGAGAGAGAGAGAGAGAGAGTAAACGCCGTTTTTTTTTCAGTTTTCCTGAGACATCGCTATGAATTCACG GAGATTTTCTTTTTT |
Primers for UN76679 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATTTACAGCGTCCTCCGGTA | 59.592 | 20 | GCGATGTCTCAGGAAAACTGA | 60.39 | 21 | 130 | 1551 | 1680 |
2 | TTTACAGCGTCCTCCGGTAT | 59.592 | 20 | GCGATGTCTCAGGAAAACTGA | 60.39 | 21 | 129 | 1552 | 1680 |
3 | ATTTACAGCGTCCTCCGGTA | 59.592 | 20 | CCGTGAATTCATAGCGATGTC | 60.484 | 21 | 143 | 1551 | 1693 |