Simple sequence repeat (SSR)
>UN76451 TTGAAAAATATAAAGTGTACACTATATTTCTGTATGTTTCATGTTCTAATACGGGTTGAATAGAAATGAGCTTACAAGCAACCTTGTTTTGCTT CAACGAAATATGAAGTAACTATACAATGGCAGAAGCATAAGTTTGTGGTGTTTTTTTTACCGTGTGGATAACCTTAAGAAAGCGTGAAAAAATC TTCCAAAGACCGAACCAAGCTTGGAGGCCAATGTTTTGTATCTTTTACATATCCAAGGTCCGAATATTTTGGATCGAGAAGAGTTGCTATTGTG AACTGATTTTCAGCAAGTAACGGGGCATGCTTATCAGAGTATAACGCCGCTGCCAGAGCTGCATGCACTTCAGGACTGCCTTTTAAGGAAATGG AAACATCCTCCATTTCCGCTATTGCTTCATTTTTGTCTCCGACCTCATATAAGGTTAATGCTCTACCAACTCTTGCATACTCTGAAAGAGCAAA GTCTTTGTATTCTGTTACAACCTGAGTGAAGCATTGAAGAGCTTGAACATAATCACCCTTGGCTTGAAAGTCCCTCCCTTTTTCAAGAAGGTCA ACAGCTTCCTCCACTCTCCTTGTCACCTCATTACTCGCTGCTCTTTCGGCTTCCGTAAGCGGGTCGAAAACTGAAGCCCCCCAAGAACAACTTG TAGTTGCCAAAGATATTAATGGAGCAGATACCAGCAGCACTAGTTGCCTCCTTTGTATTCTTCTTCTTCTTCTTAAAGAGGAGGAGGATACGAT GATGAATGGTTGCTTACAAATTGGGGTGGTTTTGTTTTTGGGAAGATGAAGAAGAAGATGTGAAATTGGTGGTGGGCAGGGGCTGCAACTGCCC ATTGATATCACTGACTCGGTACCACTCTCCCC |
Primers for UN76451 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAGGTCAACAGCTTCCTCCA | 59.844 | 20 | ACCACCCCAATTTGTAAGCA | 60.227 | 20 | 225 | 558 | 782 |
2 | GTAAGCGGGTCGAAAACTGA | 60.249 | 20 | ACCACCCCAATTTGTAAGCA | 60.227 | 20 | 164 | 619 | 782 |
3 | AAGGTCAACAGCTTCCTCCA | 59.844 | 20 | TTCCCAAAAACAAAACCACC | 59.679 | 20 | 239 | 558 | 796 |