Simple sequence repeat (SSR)
>UN76264 GTAGCATGAATTGTGAGTAGCTAGAATAATATGTAAAGGATATGAATGAATCCTGCAGGCACTGTTCTAAAAGGCTCGCAAAGGCTCCGCAAAG GCCTCGCAAAGGTGTGAGGCTTGGTCATGCCGCCACGCCACGCCTCGCGCTATTTATAACCTTGTGTGCTAGGCATGTTATGAATTGTCAACTT TTTATGTACACTTGTATATCACCTTACACCATCGTAGCGAGACAAGTTCGAAGAAGATTCAGAAGAAGCAAGGACATAATATGCTGGTAATCCA AGGGAAAAAGATGGCAACGAGACCTCTGTCACGGTACTTCCTAATTCTTCCAGATGAGAAATAGCACCACGGATTGACGACACAACTTCCTGAT CAACTCCATCCCCAATAGTTTCAGATATTACACCAACCCGTAGTCCTTTTAAAGGTTGTGATTCAAAATAATCTTTGGAGATGAATTGAGCTGT GAAGTCATTAACATCCCGTTTGCTACTAGTGGCGTCAAATTTATCATGACCAGAAATGGCTTGAAGAAGAATGCCAGCATCAGCAACCGTTGTG CCAAAGCACCCAATAACATCCAGTGAAGATGCATACGCCACCAGCCCATATCGTGAGACACGGCCATATGTCGGCTTTAATCCTACAACACCAC AAAAAGACGCCGGTTGTCTTACACTTCCACCAGTATCACTTCCCAATGATACTACACACTGCCTAGCGGAAACAGCTGCAGCTGAGCCTCCTGA TGACCCCCCTGGTACACATTCAAGGTCCCATGGATTTGCTGTAACCCACAATAATCGCCCCACACTCCCTCAGCTTCCTCACCACACTCGCATC ATACGCAGGCCGATAATTCTCCAATATCTTCGACCCGGCAGTACACGCCATATCCTTAGCACAAATATTATCCTTAACACCCACAAGTACACCA GCAAGTGGGCCCACATTTTCATTTCTTTCAAGTTTTTTGTCAATTTCATCAGCTTGGGCTAAAAGGGTGTTTGAAATGTGGAGGAAAGATTTCA AAAGGGGTTCGGTTTGTTGGATACGGTTGAGGGTTTGTTGGGTTAGTTCCTTGGTTGTTGTTTGGTGGGTTTTGAGGGATTTTTGGAGTGTTTG GATTTGGGAGTTGGTGATGGTGTGGTGGTGGTGGTGGTGGTGGTGAAGAAACATTTGTGTTTGTGTCATGAGTACTTGAAAAGGGTTTTGCTAA AAAGTCTTGTAGGATGAAGCCCCGGTAGCCTTTATTGACAGCAGCATGGTCGTTGCTAGTAGGAAGGTTGATATCTTTCCAAACTTCTTCCATT GTTCTAGTAGTGTTGTTTAAAAAAGGTGAGTTGTTAGAAGATGCGTTTGAGGAAGAAGAAGATGAGAGTGTGGTGGATTTTGTTGAAACCCTAC TAAGTTTATGGTGATAGTGGTTTTTGGTCAGATTCGTACTATCATGATCATCATGATCAACACCACCACCATGACTAGATAACATTTGTGGCTA TAGCAGTGTGTGTGTGTTTTGAGTGTGCTTTGAATATGTGTAAGAGATAGCTAGGAGTGAACTCTAATTTGACATTTGTCATAGGACATATG |
Primers for UN76264 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTGGGCTAAAAGGGTGTTTG | 59.968 | 20 | TGTCAATAAAGGCTACCGGG | 59.953 | 20 | 269 | 994 | 1262 |
2 | GGTGGGTTTTGAGGGATTTT | 60.032 | 20 | TGTCAATAAAGGCTACCGGG | 59.953 | 20 | 165 | 1098 | 1262 |
3 | AGCTTGGGCTAAAAGGGTGT | 60.13 | 20 | TGTCAATAAAGGCTACCGGG | 59.953 | 20 | 272 | 991 | 1262 |