Simple sequence repeat (SSR)
>UN76263 GTAGCATGAATTGTGAGTAGCTAGAATAATATGTAAAGGATATGAATGAATCCTGCAGGCACTGTTCTAAAAGGCTCGCAAAGGCTCCGCAAAG GCCTCGCAAAGGTGTGAGGCTTGGTCATGCCGCCACGCCACGCCTCGCGCTATTTATAACCTTGTGTGCTAGGCATGTTATGAATTGTCAACTT TTTATGTACACTTGTATATCACCTTACACCATCGTAGCGAGACAAGTTCGAAGAAGATTCAGAAGAAGCAAGGACATAATATGCTGGTAATCCA AGGGAAAAAGATGGCAACGAGACCTCTGTCACGGTACTTCCTAATTCTTCCAGATGAGAAATAGCACCACGGATTGACGACACAACTTCCTGAT CAACTCCATCCCCAATAGTTTCAGATATTACACCAACCCGTAGTCCTTTTAAAGGTTGTGATTCAAAATAATCTTTGGAGATGAATTGAGCTGT GAAGTCATTAACATCCCGTTTGCTACTAGTGGCGTCAAATTTATCATGACCAGAAATGGCTTGAAGAAGAATGCCAGCATCAGCAACCGTTGTG CCAAAGCACCCAATAACATCCAGTGAAGATGCATACGCCACCAGCCCATATCGTGAGACACGGCCATATGTCGGCTTTAATCCTACAACACCAC AAAAAGACGCCGGTTGTCTTACACTTCCACCAGTATCACTTCCCAATGATACTACACACTGCCTAGCGGAAACAGCTGCAGCTGAGCCTCCTGA TGACCCCCCTGGTACACATTCAAGGTCCCATGGATTTGCTGTAACCTGATACGCAGAACCTTCGGTAGTACTCCCCATCCCAAACTCATCCAAA TTCGTCTTACCCACAATAATCGCCCCACACTCCCTCAACTTCCTAACCACACTCGCATCATACGCAGGGCGATAATTCTCCAATATCTTCGACC CGGCAGTACACGCCATATCCTTAGCACAAATATTATCCTTAACACCCACAAGTACACCAGCAAGTGGGCCCACATTTTCATTTCTTTCAAGTTT TTTGTCAATTTCATCAGCTTGGGCTAAAAGGGTGTTTGAAATGTGGAGGAAAGATTTCAAAAGGGGTTCGGTTTGTTGGATACGGTTGAGGGTT TGTTGGGTTAGTTCCTTGGTTGTTGTTTGGTGGGTTTTGAGGGATTTTTGGAGTGTTTGGATTTGGGAGTTGGTGATGGTGTGGTGGTGGTGGT GGTGGTGGTGAAGAAACATTTGTGTTTGTGTCATGAGTACTTGAAAAGGGTTTTGCTAAAAAGTCTTGTAGGATGAAGCCCCGGTAGCCTTTAT TGACAGCAGCATGGTCGTTGCTAGTAGGAAGGTTGATATCTTTCCAAACTTCTTCCATTGTTCTAGTAGTGTTGTTTAAAAAAGGTGAGTTGTT AGAAGATGCGTTTGAGGAAGAAGAAGATGAGAGTGTGGTGGATTTTGTTGAAACCCTACTAAGTTTATGGTGATAGTGGTTTTTGGTCAGATTC GTACTATCATGATCATCATGATCAACACCACCACCATGACTAGATAACATTTGTGGCTATAGCAGTGTGTGTGTGTTTTGAGTGTGCTTTGAAT ATGTGTAAGAGATAGCTAGGAGTGAACTCTAATTTGACATTTGTCATAGGACATATG |
Primers for UN76263 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCAACACCACCACCATGACT | 59.846 | 20 | TGTCAAATTAGAGTTCACTCCTAGC | 58.247 | 25 | 112 | 1526 | 1637 |
2 | TCATGATCAACACCACCACC | 60.23 | 20 | TGTCAAATTAGAGTTCACTCCTAGC | 58.247 | 25 | 118 | 1520 | 1637 |
3 | GATCAACACCACCACCATGA | 60.23 | 20 | TGTCAAATTAGAGTTCACTCCTAGC | 58.247 | 25 | 114 | 1524 | 1637 |