Simple sequence repeat (SSR)
>UN76262 CAACTGTAGCTAGCATTTAAACTCATCTGCAATAATTGGTGGGATAAAGTTGCAACCTTGAAGCGTTTGCTCAAATATATGGCCCACTCTAAGC AATTTTTCCTCATCAAATGCAGCCCCGATCATTTGGAAGCCAACAGGAAGCCTAGAAGTGCCGTTTTCAACAAACCCGCATGGCAAAACCAATG CTGGTAATCCGGCTAGGTTGACATTCACAGTCATGATATCCCCAGCATACATCGCCAGTGGATCATTTTTCTTTTCACCAATTTTATATGCTGC AGATGGAGCAGCGGGTGAGATTAGAATATCATATACATCTAATGCTTCCTTGAAGCTTTTCTGGACTACAGTCCTCACCTGCTGAGCTCGCTTG TAATAAGCATCATAATAACCTGCTGAAAGCGCATATGTCCCCATTAAAATCCTCCTTTTAACCTCTGGACCAAAGCCATTAGCGCGAGAACCCC CATAAAGAGAACTCAACTCATCAGAAACAATTTGATTACCATACCTTACACCATCGTAGCGAGACAAGTTCGAAGAAGATTCAGAAGAAGCAAG GACATAATATGCTGGTAATCCAAGGGAAAAAGATGGCAACGAGACCTCTGTCACGGTACTTCCTAATTCTTCCAGATGAGAAATAGCACCACGG ATTGACGACACAACTTCCTGATCAACTCCATCCCCAATAGTTTCAGATATTACACCAACCCGTAGTCCTTTTAAAGGTTGTGATTCAAAATAAT CTTTGGAGATGAATTGAGCTGTGAAGTCATTAACATCCCGTTTGCTACTAGTGGCGTCAAATTTATCATGACCAGAAATGGCTTGAAGAAGAAT GCCAGCATCAGCAACCGTTGTGCCAAAGCACCCAATAACATCCAGTGAAGATGCATACGCCACCAGCCCATATCGTGAGACACGGCCATATGTC GGCTTTAATCCTACAACACCACAAAAAGACGCCGGTTGTCTTACACTTCCACCAGTATCACTTCCCAATGATACTACACACTGCCTAGCGGAAA CAGCTGCAGCTGAGCCTCCTGATGACCCCCCTGGTACACATTCAAGGTCCCATGGATTTGCTGTAACCCACAATAATCGCCCCACACTCCCTCA GCTTCCTCACCACACTCGCATCATACGCAGGCCGATAATTCTCCAATATCTTCGACCCGGCAGTACACGCCATATCCTTAGCACAAATATTATC CTTAACACCCACAAGTACACCAGCAAGTGGGCCCACATTTTCATTTCTTTCAAGTTTTTTGTCAATTTCATCAGCTTGGGCTAAAAGGGTGTTT GAAATGTGGAGGAAAGATTTCAAAAGGGGTTCGGTTTGTTGGATACGGTTGAGGGTTTGTTGGGTTAGTTCCTTGGTTGTTGTTTGGTGGGTTT TGAGGGATTTTTGGAGTGTTTGGATTTGGGAGTTGGTGATGGTGTGGTGGTGGTGGTGGTGGTGGTGAAGAAACATTTGTGTTTGTGTCATGAG TACTTGAAAAGGGTTTTGCTAAAAAGTCTTGTAGGATGAAGCCCCGGTAGCCTTTATTGACAGCAGCATGGTCGTTGCTAGTAGGAAGGTTGAT ATCTTTCCAAACTTCTTCCATTGTTCTAGTAGTGTTGTTTAAAAAAGGTGAGTTGTTAGAAGATGCGTTTGAGGAAGAAGAAGATGAGAGTGTG GTGGATTTTGTTGAAACCCTACTAAGTTTATGGTGATAGTGGTTTTTGGTCAGATTCGTACTATCATGATCATCATGATCAACACCACCACCAT GACTAGATAACATTTGTGGCTATAGCAGTGTGTGTGTGTTTTGAGTGTGCTTTGAATATGTGTAAGAGATAGCTAGGAGTGAACTCTAATTTGA CATTTGTCATAGGACATATG |
Primers for UN76262 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCAACACCACCACCATGACT | 59.846 | 20 | TGTCAAATTAGAGTTCACTCCTAGC | 58.247 | 25 | 112 | 1771 | 1882 |
2 | TCATGATCAACACCACCACC | 60.23 | 20 | TGTCAAATTAGAGTTCACTCCTAGC | 58.247 | 25 | 118 | 1765 | 1882 |
3 | GATCAACACCACCACCATGA | 60.23 | 20 | TGTCAAATTAGAGTTCACTCCTAGC | 58.247 | 25 | 114 | 1769 | 1882 |