Simple sequence repeat (SSR)
>UN75956 CTCCGGATTATCCCTCCACCCCCGCCAAAGTTTACTCGGTCTTCAAAAACCGAGGAAGTTCTACACTCAACACCAACAATTCACACAATAATCT AACACAAACACTTTTACAACTAGTAAACCATAAATTATCTTCCGAAAACCAACAACCAATCATTTTTTTTTCATCTTAAACAAAGCCGTAATTT CGTCAAATCTAATAGCTTTCACGTGTAATCAATTTGTTCATCATCATCATCATCAAAGACGAAGCTCCGTGCAACAATGCTCCTCCTCTCCATC ATAATCACCCTCATCCTTAGGCAACTCATTCAAATCAAACATAAAAACACTTTTCTTACTATCATTCTCAACACCTTCAACCTCATCATCTCCC TCATCCACAACAACCGAAGAGCTCGAATCGCAATAATCGCAACATTCATCATCACCATCACCAACAACAACCACAGGTTTTAGTTTCACAACAG GTTTAACTACTCGGGGTCCACTAAGGGACTCATCAACAGTACTACTCATGCTACTACTAGTAGGGCGTTGTTGGTGCTGCACCACTAATACATC CTCATGAATGTTCTCCGCGGAGAAATTAGTTTTCGCTTTTTCTCCGCGGAGATTGATCGCGGCCGCGTCGTAAGCACGC |
Primers for UN75956 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCTTCCGAAAACCAACAACC | 59.948 | 20 | GAGAGGAGGAGCATTGTTGC | 59.957 | 20 | 147 | 132 | 278 |
2 | CCGAAAACCAACAACCAATC | 60.206 | 20 | GAGAGGAGGAGCATTGTTGC | 59.957 | 20 | 143 | 136 | 278 |
3 | TCTTCCGAAAACCAACAACC | 59.948 | 20 | TGGAGAGGAGGAGCATTGTT | 59.803 | 20 | 149 | 132 | 280 |