Simple sequence repeat (SSR)
>UN75677 CCCGAAATACTAGCAGTTATACAAACAGAGTATAAATAAAAGGATAAGAAACAAAAAAACATGATCTCCAAGCTTGGCAAGAAGAGTAGATGAC AAGTCTGACTGCTGTGTTGAACCCATAATGCATTTGTTACCGTTAATTTGATGAGCATGGATCATTTCGCTTTGCTTTTCCCAGCCTTCACTTC GTCTGAATCGGAGTCACTAGCATTGTAACCTGGACGTTTATCGCCAACTTTCCATACAGAGCTTCGACTCCTGGAAGCTGCTCGAAGCCAAGCT TGTCCCTTATGAGCATCCTTAACAACACCATAACCGGAAGAAAACATCTGACCAACAAGAACTTGCATATTAACATCACCAGATTCAGCTTCTT TTAACGTATCTCGAAACCATCTTCTCGTACACTCCAACACCACTTCTTTTAACGGAACCCTTTTGTTAATTAACTTATTATTCTCTTCCATTAT GATCTTAGACTTTTGTTGTTGTTGTTGTTTATGGGATTGAACGATTCGGATAGTTTTGGGGGGGTCGGGTGGAGGGAGGATTCGGGTCTTGTTG GAAACGGGTTTTTTGGTTTGTTGTTTGATTCTGTCGGAGGTTATGATTCTAGATGCGATGTCTTGTAGCCTTGCTGCTGTTGGAACTGATTTTC CCATGAGTTTCAGATTACTATTGTGTTATCTGGTTTTTTGGTCTGGATTTTCAAAGAGTGGTTTCTCATTTTTC |
Primers for UN75677 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCCAAGCTTGTCCCTTATGA | 60.214 | 20 | TATCCGAATCGTTCAATCCC | 59.722 | 20 | 248 | 275 | 522 |
2 | CCGGAAGAAAACATCTGACC | 59.526 | 20 | TTTCCAACAAGACCCGAATC | 59.91 | 20 | 253 | 316 | 568 |
3 | GCCAAGCTTGTCCCTTATGA | 60.214 | 20 | CCCCCAAAACTATCCGAATC | 60.502 | 20 | 258 | 275 | 532 |