Simple sequence repeat (SSR)
| >UN75414 GGCTAGTATACATAAAAAGCAGTCCTGGTAAAGGTCTTACAAATAAGCTTTAGTCTAAAATTCCATTTATCCTCTTCCAGGACTAAATAATTAC AGCAACAAATAACTGGAGTGCAAAATCCCAGTGAGAAGAATTGTGGCGCAAAAACCAACTGAGGTCAAAAGAATCGATCATATGATGCCAGAAA CTTTAAGGGACGATAATACAACAAATATCAACCAAAGCAGCATAAAGTACGCACAAGTAATCCAAGCCCAAACTCTCGGTCCTCCAAGCTCAGC ACCAAACACAATTCGTCTAAGTACTAAAATTGAAATGCAGCCGACAGATGTTGAGAAGAAAACCAGCAAAGAGAAACTTAGCCCACGTGCATTC TCGATATGCAGAGGTTCTCCATATGCTATTAAGTTGTAAGCTGTGTCAATCAACCAGGGAACTCCAATTCCCACATAAATGTTCACTGAATTGC TGCAAGTAATGTTTGCAATGGCGGAGTCTGCAGTTGTTTGCCGTTCAGCAGCAATCTTACTTGCCACTAAATCAGGCCACGAGGTTCCAGCTGC CAATGCAGTGAATGCTATGACATAAGCATTGATTCCTGTAACACAGCTTATCAGGTCTGTGAACCTTGTGACAATGTAAGCTATTCCGCTGATG AACATCAGAGAACAGATAAAAGCAATCCACCCATGAGCAATCTGATATGGAGGCACAAATGCAAATAACAGTCTCCATGGCGCCACGACAAAAT GCCACAAAACTCGTCCGAAACTTATATTTTCTTCTCTCAATTTTGAGTTTCTTAACATGAGAGCATCCACAAATTGCTGCTTCCAGACTGAGAT AATACCGGGTTCTGCATACATATCTGTTCCATCAAAATTCTTATCATTTGACAACTCTGGATCATGTAAAGGCAGATGCTGATACGATGAGCTT TCTTCGTGGATAGCGAATATATCCACGATCCCTTTATCTCGATCATTATCATTTCCATTTTTGTGAGGAGAGACCTCTGCTGGTACCCATTCTT CTGGTCTTACAGTTCGCTCAAAAGGAAGAGATATAAAGGGCCAACGCTTGTCTTGAGCGTAAGCGTGTAGAAGTAAAAGCCCAAATTGAAGCAC TGTTAATAAGGCCTCCCAGAAAGTGATAACATTTGGACTCCATACCTCCAATATTATGTAGAGCCAAATATATGCCCAGAAGGACCAAAACAGC TCAACAATCCAAACGCCCAAATCTGAAATCTTTTTCAGTTCTCCAGCTTTTGGAACGACCACACAAACCGCGTGAATGGGAAAGAGATCAAATG CAGCAGAACCAACAAGTGTTCCAGGGCCTAAACCTCCAGCATATCGCTGACCGATATTCCTTATCGCATCAATAGTAGCCAAAGAAATCTGAGG AAAACTAGTACCAAAAGCCAACAAAGTAATATCCGCAATAGTATAATTCCAAACCTTAACATATCTAACATTTTTCACATCATCATCATCATCA ACAACCATCCTAGTTTGTTGCACAACATGTTCCATAGACTTAAAAAACCTCGCAGTTATAGCCGATAACCCGAAAAAACAATAAGCAAGTCCTA AACAATACATGAAAACACGAAAACCGTATCCTAGTGATGTTTCACCATGGAACATGAAATACAGGTCACATGTTTCCGACATAATGTTGTTGTT ATTGTTGTTGTCGTGTCTGACCAGTTCTGTTAACATGTTTTTAAGGTTATGGACAATGTTTTTGATTTCCAGTTACGTTGGAGAAGGTTGTCAC ATTGATC |
Primers for UN75414 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CAAGTGTTCCAGGGCCTAAA | 60.103 | 20 | CGGCTATAACTGCGAGGTTT | 59.384 | 20 | 240 | 1329 | 1568 |
| 2 | AACCAACAAGTGTTCCAGGG | 59.861 | 20 | CGGCTATAACTGCGAGGTTT | 59.384 | 20 | 246 | 1323 | 1568 |
| 3 | TCAAATGCAGCAGAACCAAC | 59.847 | 20 | CGGCTATAACTGCGAGGTTT | 59.384 | 20 | 259 | 1310 | 1568 |