Simple sequence repeat (SSR)
>UN75138 AAATTGGACTGAAGGGTCCCCCTATTTAAACTCGAAACTAAACCACCACCAACCACCCCCGTAGGATAATTCTCTTGAAGAAAAGAGAATTCAT GATGGTGCTGGGAGTGGCTATCATTAGCCGTGACGTTGAATGGCTGAAAATAGTCCATTGGACTTGTGGTCCAATGCATTCTTGAATCCGTACT AACCCCTGGATTCAAATCGCTGGTGTGACTAACACCAGTCACACCAGCAAGAAGATCCGCAAAGGAAGATGGTTGTGATGAAGCAACCGTCACA ACCGCCTCTTTCTTTTTTTCCTTCTTCACGGCCATTTCTCTAGCTCGTTCTCTAGCCCGAATCCTATTCTCGGATCTGGCCAGCGAAAGGCCAG AACCCTTACTCGTCTCAGATGTACTACTATTATTATTATTATCATTATCATTATTCTCTTGATAATTATTAGTAAAATCTTGGTAAACTGGATC CCTTAACTCGGCCTCGTTGTTCCTGGTGTAGTTTTCATCTAACACACCAGGAAACAACGGATCGAGTGAAGGAAGCTCATCTATAGCACCCGCA GCCGCTTTCATTAGCCACTCAACAGCTTTACTAGGTTGATCATAACCTAACCGATCTTGCAAGTCATAAAACTGAATAGCTGTCGAAACCGACA ACCTAACACGCCTATCCCTTAAACCCTTTGATGTCAAAACCTTACTATGCCTATCTTTTCCACCCGAGCCTCTCGAAACCCTAACAATCCTAGA AGAAGGCCATCCACTTCCATCATGAGTTAAAACTCTTTGATACTTGCTAACTTGTGCTTGCCTTTGAGCTTGAGCTTGGGTTTTCGCTTGGATA TCATCTACCTCCATACCCTACTTTCATACCCAGATCTTCATTTCTCTTTATACAATATAT |
Primers for UN75138 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CACGGCCATTTCTCTAGCTC | 59.978 | 20 | CACTCGATCCGTTGTTTCCT | 60.111 | 20 | 230 | 309 | 538 |
2 | CACGGCCATTTCTCTAGCTC | 59.978 | 20 | CCTTCACTCGATCCGTTGTT | 60.111 | 20 | 234 | 309 | 542 |
3 | CACGGCCATTTCTCTAGCTC | 59.978 | 20 | ACTCGATCCGTTGTTTCCTG | 60.111 | 20 | 229 | 309 | 537 |