Simple sequence repeat (SSR)
>UN75027 GAAAGAATTGAAGATTATGAGTTGTTATAGAATTACTCTCTAATCACTATTTCCAGAAGCGCTTGCCTGTGATTTATAAGTACTTTTTAATTAT AAGCATAAGCAGTCCCAAACACCCTCGAAAGTAAGTTGGCAATAAATTTTTATATTATTTTATGATGTTCTACTTTGGGTTGTCCCTAAAGTAA AGCATACCGTAGCCTGTGGCGCTGAAGCATATGCTGATATGCATATAAGATAATGAGATTAAACGGTACTTTGGACATAGTTGTTGATGTGACC ATCCTTGTTGACAGGAGTAGTCGGTTCATTTGTATTGATCATCCATTCGCCATCAACTATGTACTTGTACTCGTAACGCCCCTCCTGCGTAAAT CTCTATGAAGAATCCATGAACAGTTCTTCCCGTCATATTGTAATGGAATTTTCAGTTGGTGAAGTTGTTTGCGTCGTAACCAAATTGCACATTA GCCGCCTCATTTATAAGCAAATGAAAGGAAGCCCATATCATCCGAAACTTAGGACCATGTGGAATGATAGATAAGCTTGAAGGTTTCTTAGTAG GTTTCTCCGATTCCGTAACCTCATTTTCGAATTTGTTGCCATTCTTTATCGCGGTTATGTAATCAGCAACTTTACCTTTAACGGGTATCCCATG AGAACTCTAAGGTAAACCCGATATCCTTGCCCTTCTTCGTGGCACCGCACTTTTTATCAAAATGTTCGGCATCAAGAAATCTTCATTATTGGGG CACACATTGTATGTCTTATTATTGGGGCAGGCATAAAGAATATGTTGATAAAGAATAACTACCTTCGACATCATCCTAAGGTAAACCCACACGT TGCAGCCCCCATTTCAGCCCCCATAACTACCTTCGGCATCATCCTTCTTATGGGAGTCATTTGAAGATCCCCAGCCTCCTCCTCCTCCTATTTG ACCACCATCATTGCCCCAAC |
Primers for UN75027 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTATTGGGGCAGGCATAAAG | 59.922 | 20 | GTTGGGGCAATGATGGTG | 60.761 | 18 | 190 | 771 | 960 |
2 | TCAAAATGTTCGGCATCAAG | 59.664 | 20 | GTTGGGGCAATGATGGTG | 60.761 | 18 | 246 | 715 | 960 |
3 | CAAAATGTTCGGCATCAAGA | 59.664 | 20 | GTTGGGGCAATGATGGTG | 60.761 | 18 | 245 | 716 | 960 |