Simple sequence repeat (SSR)
| >UN04333 TCGTCCAGCAAAACAAGAAGTTATAATTTAGAAGCAAACCTACAGAAAGAAAATACTTATGCAGTTATAGTTTAAGAAAAGAACTGTACTAAAT ACCCTGCAAGCAATTAATGTTCATAGCGATTGGCAGGCAGAAATCAGAAGCAGATCAAAGGTGCAGCAATTCATCATCTATCTTGTGAGCATGG TTCGCAGATTCACCAATTACCTTAGTCGCATTTCTCTACTCGTCATCCATGGTGTCACTCGTCATCATCATCATCATGAACCTTGATCTCTTTG CACTTTCAGGCGATCTGTTCCACGGTTCACCATCCTGAGTAGACCTCTTGCGTACTTTCGCCTTACTACTAGATCCAGCTGCATCACTGGTGCT GGTTTTGTTAACATTCACATGAGAATCAACCTCTGAAAGCCCATTCTCTAACGCCGTCACCAAGTTCTGAAAGTATGACCGAGTCACATCAGTC AAACCGGTTAACTTTATCCGAAAACTATTGAAGATAACCTTAGTAGTTGCATCTTCATCCTCTTTTTTAATATAAATTTGTAGATCCTTTTCTG CACAAAGATGAAGCCTTTCTAATCCAACCTCTGCTTCACCCTGCAAAAACTCAAAAAATGCTTTTTTCTCCTTTTCTTTTTCGGGTATGTAAAA TCCATATGCATAGGTCCATTTTAGCATTCGCCTGCATTCAACTATCTGTAACCAAGCATCTGTAATGAATTGTAACTGTGTTTCAGGCATATCG TAATTCGAACTAAGTATCTTGAGATCAACTGTTTCAATCTTGTGAAGATCAGAAAGAGCTTTTTTCCTCGACTTTTCATTTGCAGCCCAACGTT CATAGTAATGTGTGTATCTCTGAATCGCTTTTTTAGCTAAATCACGTTGTTGTTCATCTTTATTAACTATACCCCCTTCTAATTTATAACGATT ACAAGTTGTACTAACATGTTGCCTCCAAGGACCAAGACACAACCAACAGAACTCATGTAGGCAAGGCTTTCTACACGTCATATGCATACAACCA TCATTTTTCTCAATCGACTTTTTGCACTTAGGACAAGGCTTCGTGTACGCTAGAATCCAAGTAGTATTTTCAGCTTCAGCTGAATTCTTCAACA CCCATTTACCAACAGTTTCGCAATCTAAAGGACTATGGGCGTCCTCCATACAATTCCAACAGAATACATGCTTACAATTACAAGTAACATCATA ACTATCATCCTCAAAATTATCATCATACTCAACAGCATAATCACATCCAGGACCAGGACACCACTTAATCATCTTCTGACTACTCTCCACATAA GACCTAAGCCAAAACCTATCATACTTTTTCTTCTCCTCACCCTCGGCTAAAATATTAACCATATCAGGGCCAACTGCAGCCCCACAAGATTGTT CGGGACACTTTAAAGTCAAACATCCCGGACCATCATTAATAGCAGTATTAACATAACTTTCCCAACACACCTTACAAAAAACATGACCACACCC ACAATTCGCAGTATCCTTAACCATAACAGAATCAAAACAAATACCGCAATCAATTTCACTTTCATCATTTTTAGGAAACTTAACATCATGATCA ACGTCTAGCATACCAATCAATTCCCTAACTTTAAGTTCATCTCCAAACCAAGCTTCATGAACATTAGTAACACACCAATTATAATTCAACAAAA GCATGCAAGCCTCATCTTTCGATATCGATAAAACAGAAGTTACCTTTTTAATTTCCTCTTTTTGACCTTCGATCAATTTATCTTCTTTTAAAAT AACGTAACTTTTTTCATTGCTTGCTTTCTTATCATCAATCGGAACATCGTCATTCTCAGCAGCA |
Primers for UN04333 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TCGTCATCCATGGTGTCACT | 59.962 | 20 | GCGAAAGTACGCAAGAGGTC | 60.022 | 20 | 116 | 228 | 343 |
| 2 | TCGTCATCCATGGTGTCACT | 59.962 | 20 | ACTTGGTGACGGCGTTAGAG | 60.312 | 20 | 214 | 228 | 441 |
| 3 | TCGTCATCCATGGTGTCACT | 59.962 | 20 | GAATGGGCTTTCAGAGGTTG | 59.67 | 20 | 195 | 228 | 422 |