Simple sequence repeat (SSR)
>UN74819 GTTAAATTTAACAATAATACAGTAACTTATAAGACCATCAAAATAGTTAAATATGGAACATGGCCTAATGTATCATATTAATTTCTCTTAGATT ACATAAAAATGGGAAGTTAAATAGATTTATATTACAAATGGTGGCTAATGAATCCATTCTATACCTCTAGTGACTGCAGCTCAATGTTAGAACC TTGTCGTGTGCTCGACTTTTCATTTTCAAGATATTGGAGGAAATCCATGACCATAGGATCGGTCCACGGGCATCCTAAGGGAGCATTCTCGCCT GCAACCCATCCTAAATGACCTCCTTTTGGTGTAACTATCAGTACACAGTTTGGGTTCGCCTTAATATCCTCACGGGGTATTGCATCATCAGGTG CGATTGGGTCATTTTTTGCCTGTATGCAAAGCAAGGGTGTGCGGACATGCTTTATGTAATTTGCACTGCATGATTTTTGCAAATACTCATCGAC TGACTTGAAACCAAATGAAACTCGGGTCAGTCCTTCATCGTAATCCCGGATAGTTTGGGCATTAGCAGCCAATTCGATATTGTAATCGCCTCCG AGGTCTTCAAACAGAAGAAGATGCTTCTTTAAAATGCCACTCAAAGCCTTGCCAAGAGATCTATTGTAAATCTTGTTGAAACCTTGGCTTATGA AATCATCTGATTTGACCAAATCGAAAGGATTACACATGGAAACCGCACCAGAAAACCGGCTTGCACGAGCCTCCTTTCCCAAATATTGAACAAG AATGTTAGCTCCCATGGACCAACCAACACCGTATAGATTTGCTTTCGGATACCTACCGCCAACGTGCTCCACTACTTCATCAAGATCTCCTAAA AATGAAGCTGAATACATCTGAGGTGTAGTGACAGGGCTATCAGCACATCCACGACTATTGAATACCACCACACGCCACCCACTATTTCTTGCCC TCACCAACATATGCCTTACATATGAATCATCACTTCCTCCGGTCAAACCCGGAAGCAATAGCAGAACAGGAGTCTCTTCAGGCAACCTCTTAGC ATCACCAGAAACCCAATCAAGAGTAACAGTCCCATCATCTTTAGTCCTAAGACACTCCCTCTTAAGCTTCACATCAGGTATCTCCCTAAAAAAA GCAGCAAATATAGTTTCCACGTGGCAGTTTGACCCAAACACTGGATAATGACTGTACTCACGTTCCAGATGAGTTTTTATAACTGGACATAGCA ACTCACTTGCCCCACCTATTACTTCTAGTGACGGGTGATAATCCTTAAACTGTTGAACTGCTGTTGTTGGTGTTGTTGTTGTTGTGTCTAGGCG GGTGGCCATGATGGGGCGTGGTCTCACGCGCGAGTGTGTGAGTAGTGTTGGACGGAAGAGTGATGAGTGGGTGAGATGAGTTGCTGACATTGTT TT |
Primers for UN74819 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGCAGTTTGACCCAAACACT | 60.012 | 20 | CCCACTCATCACTCTTCCGT | 60.112 | 20 | 237 | 1151 | 1387 |
2 | GGCAGTTTGACCCAAACACT | 60.012 | 20 | ACCCACTCATCACTCTTCCG | 60.112 | 20 | 238 | 1151 | 1388 |
3 | GGCAGTTTGACCCAAACACT | 60.012 | 20 | CATCACTCTTCCGTCCAACA | 59.676 | 20 | 231 | 1151 | 1381 |