Simple sequence repeat (SSR)
>UN74682 CCCCACACCATCACCTTAGGACTCCACCCAACAAACAGCCGTACAAATTATATTATTGACTGCAACTTCATCTTCAGTTCGGAGTTTTCACTTT CACCAACATATGAATCTGCAAATTCAGTAAGCATTTCCGCCGCCAACATTCAACATCTTTTGACTATCTTATTTCAGATAGAGGCAAATCTTTT GATGCAATATTAAGAGTGTGTTTCTCAGATCCAAATATGCGTTGAGAGAGAGAGTAAAGGCGGTGATTGATATTAGACTCAGGATAAGGATTAA GAGAGAGAGAGAGGCGGTGAAAGGTTCCAGCTGGAAATGTGTGGAATTATCCTTGCCGATGCTTTAGTATCAAAGAAAACGGGCCAAAAAAAAG ATCTTCCACAACCCAAACAGGAAAGGGCAAGGCTCGTAAACTATTTAGTAGTAAAAAAACAATGGATATATCATACCTGACTTTGCTTTGGAGG CTGAAATGTACATACCTGACATGTTTGCCCTGAAAGTGGGTGTATCATATCTGCCTTCTTCAAACCCAACTATTAAGCTTTCACCTTCGACATT ATAGGTATATCTTTCCGTGTCCAAGGGAATTTCTCAATTGTAGCAGAACCTTTCAGGTTGCTTGTATCTATCTCCTTTTTATGTTTCTTGACAG AAGGTTCTTTCGCTTTCACCC |
Primers for UN74682 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATTCAGTAAGCATTTCCGCC | 59.186 | 20 | TGGCCCGTTTTCTTTGATAC | 59.938 | 20 | 253 | 116 | 368 |
2 | CGCCAACATTCAACATCTTTT | 59.989 | 21 | TGGCCCGTTTTCTTTGATAC | 59.938 | 20 | 234 | 135 | 368 |
3 | ATTCAGTAAGCATTTCCGCC | 59.186 | 20 | CGGCAAGGATAATTCCACAC | 60.331 | 20 | 225 | 116 | 340 |