Simple sequence repeat (SSR)
>UN74327 CGATAATCCTCAATACTCGATGAACAAAACTGAGACTAATAACCAGCCCCTAAATATATTCATACCAACACAAAGCAACCAACACACCACCACC ACTAGAATCTTACTTCCAATGTATATTCCCAATTAACAAAAATTAAAAAACTAAAAAACTAATCAACCAAAATGTACCCATTAAATCATAACCA CCATTCTCGCTCCGAGGACACACTTTCTGTTAGTTTCTTTCTCACGAAGTCGACGGACAGTCACGCACAAAGTGGCCTGGCTCACCACAGTTGT AACAGTCATTACCAGCTCCACCAGACTTGTACCCACCAACGCGGTCAGACCTCGAGTTCCCACGACCACCACTTCCGCCACGATTCCCAACGGT GCAATCCCTAGCCAAGTGCCCCACCTCACCACAGCTGTAACAACCACCGGCATTCCCACGACGCCCACCATCACTAGAACAATCCTTGGCCATA TGACCCACCTCACCACAAGTAAAGCACGCACCACCATTACCACCACGAGAACCCCTCCCACCATCAACACTAGCACTAGTACAGTCCCTGGCCA TATGCCCCTCTTCCCCACAGTTAAAACAGCCACCACCAGCACGAGCACCAGTGCCACGTGTACAGTCCCTAGCAATATGACCCAACCCACCACA AGTATAACAACCACCAGACCTGACCACCACATTACTACTACAATCCCTAGCAATATGGCCAACACCCCCACAGTTATAACACTCAACCGCATTA ACACTCCTAAACCCAACACCATTACTATCCCCTCTAAACCCAGATCTCCGAGCACCATCACGGCTGCCGTCACGACGGCGGCGTTCAATGTTAG AGCCATCTAAAGCAGTAACATTAACAGCCTGCTTCCTATCATCCTTAACACTAACTAAGAACTTAACTTTTTGACCTTGTTGAAGGGTGCGATA GCCTTCAGATTGGATCTCAGAGTAATGAACAAAGAGATCTTCATCGTCACCAACTGGGGAATCTGGTTTAATGAAACCGAAACCTTTTGGATAG AAACGAATCACAACACCTGTTGCGGGTGATGATGATGATGAATTTGCTGCCATTGTTGATTGATTGATTGTTTTTTTTTTAGGGTTTGTGTGTT TGGGTATAAATATATAGAGGAGAATGAGAAACCCTAAATATATAGGCGGCTTCTTG |
Primers for UN74327 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CAGCCTGCTTCCTATCATCC | 59.797 | 20 | CCCAAACACACAAACCCTAAA | 59.749 | 21 | 262 | 871 | 1132 |
2 | GCGATAGCCTTCAGATTGGA | 60.318 | 20 | CCCAAACACACAAACCCTAAA | 59.749 | 21 | 198 | 935 | 1132 |
3 | GTCACCAACTGGGGAATCTG | 60.363 | 20 | CCCAAACACACAAACCCTAAA | 59.749 | 21 | 147 | 986 | 1132 |