Simple sequence repeat (SSR)
>UN74121 CTCTAACTCTTCAACCTTTCACACCATTTCAACCTCAAATGTCGGTATGTTCTTCTTCTTCTCCATATCCATCCTGACACACCACTTGAATAAT ACGAAAGCCATTTTATTTTGCCGGCCAACTTGCATATATTCGTTAATATCAAAGCCTGCTGGAAGAAATTAAGTTTTTCGTGTATATGTGCGCA CTATCATCATGCTATTTCGTCATTCAAGGACCTTTGCATTTCGTCAAACAGTTTATGGGCATTATCCAACTTGCCTCAAAATAACCGATAAGCA TACATGATGTAACAATCATACTAACAACATATAAACCGTCAGAAATTTGATATCAGCGATGTACAGAAAAGCATACCCATAACAGAAAATTATG TCACCATCTCGTTGAGAACAACCTCACTATCCTTGAACGCAACCTCACCCACCGGTAAATAGGGCACAATCATAAAAAAATGTGTCCTTGAATT ATTAACCCCCTGAAAAAACAGTCGTCGGAATTTAGTGTATGGGTGTCGCTGACTTTTGATTGCAAAGAGTGTGTGTGTGTGTGTTTTTTTTTAA ATTGGAAAACAGAGCACCGAACAAGAGAGAAG |
Primers for UN74121 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATCCTTGAACGCAACCTCAC | 60.119 | 20 | TCGGTGCTCTGTTTTCCAAT | 60.636 | 20 | 180 | 405 | 584 |
2 | AACCTCACCCACCGGTAAAT | 60.476 | 20 | TCGGTGCTCTGTTTTCCAAT | 60.636 | 20 | 168 | 417 | 584 |
3 | ATCCTTGAACGCAACCTCAC | 60.119 | 20 | TCTCTTGTTCGGTGCTCTGTT | 60.043 | 21 | 188 | 405 | 592 |