Simple sequence repeat (SSR)
>UN04187 TGCATTAACATCATAAAATATAAACTTAAGAACATGTTAAACCACCATCAATCCATAAACATCATTCATACCCAACAATAAAACAACCTGAAAA CTTGGAATAATTTACCAACACTCTTTACCCATATGACCCATCTCACCACACAAAGAACAAACAGCGAGATACCCTGCCTTCCCACAGTAATAAC AAATACCACCACCACCACCAACACCACGCTGAAACCCAGGCTCATTCTCATTACAGTCCCGACCGACATGCCCAAGCTTACCACACTCATAACA ACCTTCGCCACAACACTCCTTAGCCTTATGCCCATTCTTACCACATATGTAACACAACACATCGCCACCACCCTGGCTGCTATTAGGTTCCATT GTGGGGTCCTTTTTTTCTTCATCTTCCATGCATTTTTGAAGGCTTGCTATAGAGTCTTGGTGGCTTTTGATAACGTCTTGATGGTCTTGAATAG CCTTCAGAACAATTTCATTCACTTGTGGTTTTTCAAGATCATATCTTTTTGCTGCTTCATTTATTCCGCTATTTTGAACAGTGTGGATGAGTCT GTACTGCTTAATTGCCTCAAACACATTTTTATCATTTTTAGACATTGTTTTTGAATAACTTCACATAAAC |
Primers for UN04187 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCCATATGACCCATCTCACC | 60.011 | 20 | TGTGGCGAAGGTTGTTATGA | 60.111 | 20 | 173 | 122 | 294 |
2 | CCCATATGACCCATCTCACC | 60.011 | 20 | TGTTGTGGCGAAGGTTGTTA | 60.149 | 20 | 176 | 122 | 297 |
3 | CCCATATGACCCATCTCACC | 60.011 | 20 | TGAGAATGAGCCTGGGTTTC | 60.195 | 20 | 117 | 122 | 238 |